KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112225015
Entry
112225015         CDS       T05605                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    112225015 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otw03400]
    112225015 (rev1)
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    112225015 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 REV1_C IMS_C UBM BRCT_2 POLH-Rev1_HhH BRCT LIG3_BRCT IMS_HHH PTCB-BRCT Cdd1 HHH_5 DUF7674 DUF1805
Other DBs
NCBI-GeneID: 112225015
NCBI-ProteinID: XP_042162911
LinkDB
Position
LG26:complement(21736340..21756264)
AA seq 1440 aa
MSRDGRRKRDRDDNGWASRGGYMAAKVSKLDEQFKMDAPREKQKDGVCSSIFTGVAIYVN
GYTDPSADELRRLMMLHGGQFHMYYSRSKTTHIITTNLPNSKIQELRDQKVVRPEWITDS
IKAGHLLSYLQYQLYAKQKGLSFPSVCVRQGQEAAGLSHGQTQPSHSLPVPSLNNLIPVL
SNPSPSLGKPLSSHSHLHIDNLLPQPNQCNPLAGDLNPQPSHSLPLPSHLNPQPRHFSPG
HCFLSPYSSNHLYSDPGHIPHHPPSQGQAKPGCIQPLAPADTHLQTPGPIPAHPSHEHSK
PGHAQPQSSLSFSNHLQHSYRDLDFRLNGSLLAYDKMRTAQINWVQEGGGEDPCPVRPTR
GATDPPLTNGHTHPVNGALKPLDLSPKPTLPTDTPLNPDRKSTGGSVSLHPASPLSNSPL
KSDPQTSPQPPRNPTPPPVSHHRHHEQLANEQRPKPPPPTYQEATAALASRPLVLPPPKP
RQSDSPPEKPLPLDNPNLSTSPVRLNGSHHNAFTPNPAPLETNNLSAIPSNPAPPDSDHQ
SVLAKTGGIISEFYSHSRLHHISTWRSEFSEYVNTLQSRRRATGGATFPGRDRLKRQRRE
GSSAAPGPQSCILHVDMDCFFVSVGIRYRPDLKGKPVAVTSNRGPGRVAQRPGVDRQLEL
QYYQRKYSHAGVSERKDGDLEEMTSAESHVSHGNGVDPDTTCLSMAEIASCSYEARQAGV
RNGMFFGQAKQLCPSLQSVPYDFQAYKEVALAMYETLASYTHNIEALSCDEALVDCSALL
AELGATPEELASAIRTDVRERTGCTASVGMGSNILLARMATRKAKPDGQYLLRSEEVDDF
IRDHRVTSLPGVGRSMGAKLASLGVRSCGDLQQVSLQQLQKEFGPRTGQTLFRFCRGLDD
RPVRSEKERKSVSAEMNYNIRFTQVDEAESFLTNLSMEVQKRLQGAGLRGRRLTLKVMVR
KVGAPVEPSKYGGHGICDNLARSVTLAQSTDSGQLIASEVIKLFHSMRLEVQDLRGVGLQ
VQLLDGAHSAPYDPSGPKTRSIRDMLLAQRPPAQHNHTDLLADAPVADSTTNQGKSSSAR
VPPPFSTLRPPSPADPIPGTSKEEPLPSTRTPNHVRTRLNLSIEVPSPSQVDRSVLDALP
AELREQVERSWTHREKERSHNGSHHRPSSPHPSSLLSSPSSPPTPAALPVGTLVLQIPNQ
PGQPGSTGIILELPDFSQVDPEVFAALPRELQEELRSAYSRRETAQAQGIIMAEQRNPLL
QLKQVGVGRVKRRYKKKNTNSSPIKKGPSPLKKPHPPGNSPAKALQHPLRPRDLSNGLKL
ENGPSTSSLKQDVPETLSKFTPRPEPTLAGACDFTDIRTLLREWVTTISEPMEEDILQVV
KYCTDLIEDKDLEKLDLVIKYMKRLMQQSVESVWSMAFDFILDNVQVVVQQTYGSTLKIT
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgagtcgagatgggcggaggaagagggacagggatgacaacggttgggcctccaggggt
ggctacatggctgctaaggtgtccaagctggatgagcagtttaagatggacgcccccaga
gagaaacagaaagatggagtctgctctagcatcttcactggggtggccatatatgtcaac
gggtacacagaccccagtgcggacgagctgcgcaggctgatgatgctgcatgggggtcag
tttcacatgtactactcccgctccaagacaacccacataatcaccaccaacctgcccaac
agcaagatacaggagctgagggaccagaaggtggtccggccggagtggatcactgacagt
atcaaggctggccatctcctgtcctacctgcagtaccagctctatgccaagcagaaaggc
ctgagcttccccagtgtgtgtgttcgccagggccaggaggctgcaggactcagccacggg
caaacccaacccagccacagcctccctgtacccagcctcaataacctcatacctgtcctc
agcaacccatcccccagccttgggaagcccctatccagccacagtcatctacacatagac
aatctcctaccccagcccaaccagtgtaacccgctagctggtgacctcaacccccagccc
agccactcgctccccctccccagtcaccttaacccccagcccagacactttagcccagga
cactgctttctcagcccctactcctccaatcatctctactctgacccaggacacatcccc
caccacccacccagccaagggcaggccaagccaggctgcatccagcctcttgctccagcc
gacacccacttacagacccccggtcccatcccagctcaccccagccatgagcactctaaa
cctgggcacgcacaacctcagtccagtctctccttctccaaccacctccagcacagctac
cgggatctggacttcagactaaatggatcattactggcctatgacaaaatgaggaccgcc
caaataaactgggtgcaagaggggggcggtgaggacccctgtcctgtcagacccaccaga
ggggcaacggacccccctctgaccaatggtcacacccaccctgtgaatggtgccttaaag
cctctggatctctcccccaagcccacactacccacagacacacccctgaaccctgacagg
aagtccacgggggggtctgtgtccctgcatcctgccagccccctatccaactcccctttg
aaatctgacccccaaacttctccacagccccccaggaacccaactcctccccctgtgtct
caccacagacaccacgaacaactggccaatgaacagcgacccaaacctccgccgcccacc
tatcaggaggcgacggctgccttggcgtcccgcccccttgttctcccaccgccgaagccc
cgtcaatcagattcccctcctgagaaacccctcccccttgataacccaaacctctccact
tcccctgtccgtctgaatggcagtcaccacaatgcctttacacctaaccccgcccctctt
gaaaccaacaacttatcagctattccctcaaatcccgcccctccagacagtgaccaccaa
tcagtactggcgaagaccggggggatcatctcagagttctactcccactctcgtctacat
cacatctccacgtggaggagtgagttctctgagtatgtcaacacgctgcagagcaggagg
agggccacagggggcgccacattccccgggagagacaggctcaaacgccagaggagagag
ggttcgtcagctgctcctggccctcagtcctgtatcctgcatgtggacatggactgtttc
tttgtctctgtggggatcagatacaggcccgacctcaaagggaagccagtagctgtgacc
agtaaccgtggtccaggcagagtggcccagaggcctggtgttgaccgccagctagagctg
cagtactatcagaggaaatactcccatgcaggtgtctcggagaggaaggatggggacctg
gaggaaatgacctcggccgagagtcacgtctcccacggcaatggtgtggacccggacaca
acttgcctctctatggctgagattgcctcctgtagctacgaggccaggcaggcaggagtg
aggaatgggatgttttttggccaggccaaacagctgtgtccttccctgcagtctgtccct
tatgacttccaggcttacaaggaggtggcactggctatgtacgagaccctcgccagttat
actcacaacattgaagctctgagttgtgacgaggcgttggtggattgctctgccctgctg
gctgagttgggtgctacacctgaagagctggccagcgccatccggacagatgtcagggag
aggactgggtgcactgcctctgtgggcatggggtccaacatcctgctggcgaggatggcg
acccggaaggccaagccggacggacagtacctcctgaggtcagaggaagtggacgacttc
atcagggaccacagggtcactagcctgccaggtgtgggccgttctatgggcgcaaagctg
gcgtctctgggtgtgaggtcgtgtggggacctgcagcaggtgtctctacagcaactgcag
aaggagtttggccctcgcaccgggcagaccctcttcaggttctgccgaggtctcgacgac
cggcccgtacgcagcgagaaggaaaggaagtctgtctcggccgagatgaactacaacatc
cgcttcacacaggtggacgaggcggagtcgttcctgaccaacctgtccatggaggtacag
aagcgtcttcagggggcggggctcaggggtcgcagactgaccctaaaggtcatggtgcgt
aaggtgggggccccggtggagccatccaaatatggtggtcacggcatctgtgacaatctg
gccaggtcagtgaccctggcccagtcgacagacagtggtcagctgatagccagtgaggtc
atcaagctgttccactcaatgaggctggaggtgcaggacctgaggggggtgggccttcag
gtgcagctccttgatggggctcactcagccccctatgacccctccggccctaaaacacgc
tccatcagagacatgcttttggcccagcggccccccgcccaacacaaccacacagatttg
cttgctgatgctcctgttgctgactcaaccaccaatcaggggaagagttcctctgccaga
gtcccaccccccttctccactctccgccctccttcgcctgctgatccaatcccagggaca
agtaaagaagagccgctgccctctacacgcacacctaaccatgttcggacacgcctcaac
ctcagcatcgaggtcccctctccttcacaggtggacaggtcagtgttggacgccttgcct
gcagaattgagagaacaggtggagcgctcctggacccacagagagaaagagagatcccac
aacgggtcacaccaccgcccctctagccctcacccctcatcccttctttcttccccctcc
tctcctcctacccccgctgcccttcctgtaggaacactggtgcttcagatccccaaccag
cctggacagcctggctccacgggcatcatactggaactgcctgacttttcccaggttgac
ccggaggtgtttgcagcgctacccagagagctccaggaggaactgcgttcagcgtacagc
cgcagagagaccgcccaggcccaagggatcatcatggcagagcagaggaaccccctgttg
cagctgaagcaggttggagtgggtcgggtgaagaggcgctacaagaagaagaacaccaac
tccagccccattaagaaaggcccctcccctctaaagaagccccacccaccaggaaacagc
cctgccaaagccctacagcacccgctcagaccgagggacctatccaacggcctcaagctg
gagaatggaccttccacatcctccctaaagcaggatgtcccagagactctgtctaagttc
acccctcgccctgaaccaaccctggctggagcctgtgatttcacggacatccgaacacta
ctcagagaatgggtcactaccatatcagaacccatggaggaggacattctgcaggtggtc
aagtactgcactgatctgatcgaggacaaagacctggagaaacttgacctggtcatcaag
tacatgaagaggttgatgcagcagtctgtggagtctgtgtggagcatggcctttgacttc
atcctggacaacgtgcaggtggtggtacagcagacctacggcagcactctgaagatcaca
tag

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