Oncorhynchus tshawytscha (Chinook salmon): 112225016
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Entry
112225016 CDS
T05605
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112225016 (aff3)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112225016 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
112225016
NCBI-ProteinID:
XP_042162386
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All DBs
Position
LG26:complement(21758496..21793287)
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AA seq
1246 aa
AA seq
DB search
MPTVLRDKGKLSNVSLLLRCAFQDMNHSWQSQQPSGGGQAQCLLYNPKDTKQHTTQHKQR
MYSQSKLGGMTHPHLAPHKSMLADDLKLSSDDDDADKGPEQSAPWVVNNSLSEQHTHTHG
GRVRHSSSDSSGSDSYSELEEESSGQRSLSPSPETHSDPGTPTDTQALGCTKEIYHPSTT
QWQLDKWLKKVPQKSSSCDQDPSNHDHAQRATEHQSLSPDPHRAPSPSRPWGIREDYSPS
QSPVPSPRFNYSPRHSPRPSPGYSPCPSPSPCSSPCPSPTPRHSPIPSPVLSVCPSPFPS
PRATCSLSSIPQHPPRSPSPSLTHSSPRRYSQVRSPHQESHRPPTWPSLTTSPSHRPKIR
PWTAPVPSTEPKSKPRHSPYPQPPPQHSSRPKSTQTQHVPTPKTTAKAAPALTTELSHRH
KHRPRPSPNSSPKLHSQPSLKHARTLDPKSQHLSTSGLRPKESSRHSHNSNFNPRPSNGP
SLTTRLSTSLSPTPRAKTLPTTDPSRETSSRVGHCSKSSPKPHSLPNSKPSSEPHAKFSP
SPRPKVKSWAPAPHSKLPQRKPQSREREQEVDNRRETHAPKRKVDRQTEGKGEHEVERQT
EKKGERQGKKQKERKGERQGERRLAEEQLLRRPWVQSSEEEEDVEERKRRREEREKEKCK
RRRKEQQQQSGEWQAVQPKQRPHTNSERRHHPIDPQRHGTKKKRRRKSEEEEERQSQPDP
SPPPSPSSPTPVVPPTDSSASSESDSEPDLPPNVTKVPADSTSSQRPIPRRGYQGPGRPA
DSRPRVIYPRRTTASNPGQGHQIQGKQKLYTLVPFGRRELAAASHRGLRNLVVQLDLSLL
NRVPDTTTGTPASHKHSSSSASSKQKEAMRHLCIPETERGDSKRKRKSENGIQHHRESKR
SNSQTNGPSAHTESTTHRRLDPHSDTRHNGFLEDYLDSTPLSDTLDPTKPPIKTQNPEPK
MEVECCVGVSGQSQPECEPWGPPLQRAGGQRGTVTNHEPPHHAEYYMHEAKRMKHRADAM
VDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMKLKNHSGPGAR
QEDQQLAVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSPKVPTTPPIWSDSGKGT
GGPPSSLSPSPSALTLGSHTGSSPSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADS
LARDNKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcgacaagggcaaactttccaacgtctctttgttgcttcgatgt
gctttccaggacatgaaccactcctggcagtcccagcaaccctcaggaggtggccaggcc
cagtgcttactctacaaccctaaagacacaaagcagcacactactcagcacaaacaacgt
atgtattcacagtctaagctcggggggatgacccaccctcacctggcgcctcacaaatcc
atgctcgctgatgacttgaagctcagcagtgacgacgatgatgctgataagggccctgaa
cagtcagccccctgggttgttaacaacagtctgtcggagcagcacacacacacacatggt
gggagggtgagacattccagctcagactcttcaggctcagactcctacagtgaattggag
gaggagagcagtggccagcgctcccttagcccaagcccagaaacacactccgatcctggg
acacccaccgacactcaggcccttggctgcaccaaggagatatatcacccctccaccact
cagtggcagctggataagtggctgaaaaaagtcccccaaaaatcctcttcctgcgaccag
gatcccagcaatcacgaccacgcccagagagctacagagcaccagtcgctctccccagac
ccccacagagctccatctccatccagaccctgggggatcagagaggactacagccctagc
cagagccctgttcccagcccgcgctttaactacagccccaggcatagccctcggcctagc
cctggctacagcccctgccccagccccagcccctgttccagtccttgtcctagccccacc
ccaagacacagccccatccctagcccggtcctcagtgtctgtccaagccccttcccaagc
cccagagccacctgcagccttagttccattccccagcacccccctaggagtcctagtcct
agccttactcattctagcccccgccgctattctcaggttcggagtcctcatcaggaaagc
cacaggcctcccacgtggcctagcctaacaaccagcccgagccatagacccaaaatcagg
ccctggactgcccctgtacccagcactgagcccaagagcaagccaagacacagtccatat
cctcagcctccgcctcagcacagctccaggcctaaatccacacagacccagcatgttccc
actcccaagaccacagccaaggcagcccctgcactgaccactgagctgagccacaggcac
aaacacagacccaggcctagtcctaactcgagtcccaagcttcattctcagcctagcttg
aaacacgcacgcactctagaccccaaaagccaacacctatcaacctctggactaaggcct
aaggagagtagcagacacagccataattccaacttcaaccccagacccagtaatgggcct
agtttgacaaccagactcagtaccagtctcagccccacacccagggccaagaccttaccc
accacagaccctagcagagagaccagcagcagagttggtcactgttccaaatccagccca
aagccacattctctgcctaactccaaacctagttctgagcctcacgctaaattcagcccc
agccctagacccaaagtcaagtcctgggcccctgctccccactcaaagcttccacagagg
aagccccaatccagggagagagaacaggaggtggacaaccggagagagacccatgcacca
aagaggaaggtagacaggcagacagagggaaagggggaacatgaggtagagagacagaca
gaaaaaaaaggagagaggcaggggaagaaacagaaggaaagaaagggggagagacaggga
gagagaagactggcggaggagcagttgcttagacgcccctgggtccagagctcagaggag
gaagaggacgtagaggagagaaagaggagaagggaggagagagagaaggagaagtgcaag
aggaggaggaaggagcagcagcagcagagtggtgaatggcaggcggtccagcccaagcag
agacctcacaccaacagcgagcgccgccaccatccaatcgacccacaacgccacgggacc
aagaaaaagaggaggaggaagagtgaggaggaggaagagagacagtctcagccggaccct
tcccctccgccatcaccctcctcccccactcctgttgtcccacccacggactcctccgcc
tcttcagagtccgactcggagcccgatctgcctcccaacgtcaccaaagtcccggccgac
tccacatcaagccagcgtcccatccccaggagagggtaccagggcccggggaggcccgcg
gatagcaggcccagagtgatctaccccaggcgcaccaccgcatccaacccaggccagggg
caccaaatccagggaaagcagaaactctacaccctggtcccgtttggacgtcgtgagctg
gccgcagcctcccatcgaggcctgagaaacttggtggtgcagctagacctctccctgctc
aacagagtgcctgatactacgacaggcaccccagcctctcacaaacactcttcctcctct
gcctcttccaagcagaaagaagccatgagacacctgtgcatccccgagacagagagagga
gacagcaagaggaaacgcaagtcagagaatggaatccagcaccacagagagagtaagagg
agcaactcccagaccaacggcccctctgcccacacagagtctacaacgcacagacgtcta
gaccctcactcagacaccagacacaacgggttcttggaggactatctggacagtacccct
ctctctgacaccctcgaccccaccaagccccccatcaaaacacagaacccagagcctaag
atggaggttgagtgttgtgttggggtgtcagggcagtctcagcccgagtgtgaaccatgg
ggacctcctttacaacgggcagggggacagagaggaaccgtaaccaaccatgaaccccca
catcatgctgagtactacatgcatgaagccaagaggatgaagcaccgtgcagatgccatg
gtggataagctggggaaggcagtgaactatgtggatgctgctctctccttcatggagtgt
ggaaaagctatggaggagggaccactggaggccaagtctccctataccatgtacgcagag
acagtagagcttatcaggtacgccatgaagctgaagaaccactctggcccaggggctaga
caggaagaccaacagttggccgtactgtgtttccggtgccttgctctcctatactggcag
atgtttcgtctaaagaaggatcacgccctgaagtattccaaggctctattggactacttt
aagagttctccaaaagtgcctactactcccccaatctggagcgactcgggaaagggcaca
gggggacctccctcgtccctctcccccagcccctcagccctcaccctgggctctcacact
ggcagctccccctcctccctcatcagcattccccaacgtatccaccagatggcagcaaac
cacctcaacatcaccaacagtgtcctctacagctatgagtactgggaggtagcagatagc
cttgccagagacaacaaggagttttttaactacttgaacaccctgtcggggccgttgact
ctccacagtagtattgctcatgcagtccagtacaccagacaggctctacagtggatacgc
atcagtgccaatgtgggttag
DBGET
integrated database retrieval system
