Oncorhynchus tshawytscha (Chinook salmon): 112225033
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Entry
112225033 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 20-like
KO
K20641
Rho GTPase-activating protein 20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225033
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112225033
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
RA
Motif
Other DBs
NCBI-GeneID:
112225033
NCBI-ProteinID:
XP_042162573
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All DBs
Position
LG26:complement(27347051..27403800)
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AA seq
1155 aa
AA seq
DB search
MQWEYEYVRCGLKQQQTPSRSTVVALMETMSPQQGTFGQNRSGSLTGDSKLCALPDSKKK
MKTLAHRRQSAPSLVISKALTKSRSMSRENCLSPVSPETCPLVQAFLSPGRVFLAHAHTQ
LKTGLQTQERHLFLFTDTLLIAKAKSSTHFKLKAQVRLCEMWTAGCMEEVCEGSTSLDRS
FVMGWPTFNCVATFSSVEHKEKWLFLIKSRINEEKEKDDPKTIPLKIFAKDIGNCAYAKT
LAVSNSDSTTDVIQMALQQFGISGCVKDHQLWVSSIKDDSPYPLIGHEFPFSIKMSHIRD
GGGGGGKDAVPSPEGQGAMLLDQCLPPDTQCQFILKSSRVGPKQALLLEPGQKSFKRKRP
LINWAFWRGSSSQLDSVPLSPTSLSPTLGCLFGRSLSSICPPDHTLPKPVMDMLVFLYQE
GPYTRGIFRRSAGAKACRELRDRLDNGTEDTHTLTHESVFVTAAVFKDFLRNIPGSLLCV
NLYEQWVAVMAQEEEEQRMQAIHRLVHLLPSDNLLLLRHVVAVLHCIQDNAGDNQMNAFN
LSVCIAPSMLWTLSPCSPEGEATKKVCELVRFLIENCRKVLGDDVPSLFSGFPQKSNSSD
HGSDVSSFQMNDSSYDSLENELNEDPESPFQESHPLRDKAKPDSCSRDSVITLSDCDPDP
DPEAEADLLHIPPLARPRKFTPALRQPRPRQCYVQSQGPRRLRRSSEPAIGHTPGALIIQ
SDKHHLASRKASYDAAMEGEEEEEEDEVFQGLRALQLKDKVITGGERGGVGTLGQRKLKH
TPPSPLRLDASCSSLSSPATSPTGSSLSSLDSAFSQYSTDYVTSAGFLLAESSPRSPLSP
RSPKCSPPKRDTVDWSESQPPHSSRTPSTHHGLHPNTWLKRNLRLSLRQPDNGHLEEEVG
KGKGVSLPKASECKGVEVTTKRRSSSPPSYQQAILQLQKSRSPFYRGTEKPLTVRELQLL
HDQACNATHRPPTGRDVTQRPTGTGSEVIQPPQDVFYGQSGSTLTLQRQKSHSLTLAMEA
GRKVLTLPRRASEPSMVTDAASILTLERPLVKSLTHGVKGQQLPESGLRVSDIEPQRNGA
GPNSEPRFCLSPSATRAVRDYFSSQEGADSGACLQRSQEVALALVQGKREWQSRKCSDPC
VDDFDQMFFAEESYV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggaatatgaatacgtgcgctgtggtctgaagcagcagcagactccgagtcga
tctactgtagtagccttgatggaaaccatgtcgccacagcagggaactttcggacagaat
aggtctggctctttgacaggggacagcaagctctgcgcgctgccagacagcaaaaagaag
atgaagaccctggcccatcgacgacagtctgccccctccctggtcatcagcaaagcactt
accaaatcacgaagcatgtccagggagaactgcctgtctccggtcagcccagagacgtgt
cccctggtgcaggcgttcctctccccaggcagggtgttcctggcccacgcccacacccag
ctgaagactggcctgcagacgcaggagagacacctcttcctcttcactgacacactcctc
atcgccaaggccaagtcatccacccactttaaactgaaggctcaggtgcgattgtgtgag
atgtggacagcaggctgtatggaggaggtgtgtgagggcagcaccagtctagacaggagc
tttgtcatgggctggcctaccttcaactgtgttgccacattcagttctgtggagcacaag
gagaagtggctttttctcatcaaaagtcgaataaacgaagagaaagagaaggatgacccc
aagaccattcctctgaagatatttgcaaaggacattgggaattgtgcttatgctaagact
ctagctgtaagtaattcagacagcaccactgatgtcatccaaatggcactacagcagttt
ggcatttcgggctgtgtgaaagaccaccagttgtgggtgagctccattaaagatgactcc
ccctacccgctcattgggcacgagtttcctttcagtatcaagatgagtcacattcgggat
ggaggaggtggtggagggaaggatgcagttccttctccagagggccagggggcgatgctg
ctggaccagtgtctccctccagacacccagtgccagttcatcctcaagtccagccgggtg
ggtcccaaacaggctctgctcttagagccaggccagaaatcctttaagaggaagaggcca
ttgattaactgggccttctggaggggttccagtagccagctggacagtgtccccctgtcc
cccacctccctgtcccctaccctgggatgcctgttcggacggtctctcagttccatctgc
cctcctgaccacaccctgcccaaacctgtcatggacatgctggtgtttctataccaggag
ggtccatacaccaggggtatattccgtcgctctgcaggagccaaagcctgcagagagctg
agagacagactggacaatgggacagaggacacacacacactcacacacgagtctgtgttt
gtcactgctgcagtcttcaaggacttcctgcggaacattccgggcagtctgctgtgtgtg
aatctgtatgagcagtgggttgcagtgatggcgcaagaggaggaagagcagaggatgcaa
gccatccacaggttggtccatcttctgcccagtgataacctgttgctactcagacatgta
gttgccgtgctccactgtatccaagacaacgcaggcgacaaccagatgaatgccttcaac
ctgtcagtgtgcatcgctcccagcatgctgtggaccctgtccccctgtagcccagagggg
gaggcaaccaagaaggtctgtgagcttgttcggttcctgattgagaactgcaggaaggtc
ttgggagatgacgtcccctctctgtttagtggattccctcagaagagcaatagcagcgac
catggatcagacgtgtcctctttccagatgaatgactcatcctatgacagtctggagaat
gagttaaacgaggacccagagtcgcccttccaggagtcccaccctctgagagacaaggcc
aagcctgacagctgcagcagagactctgtcatcaccctgagtgactgtgaccccgaccct
gaccctgaggctgaggctgacctcctacatattcccccacttgccagacccagaaagttc
acccccgccctacggcaaccacgcccacgccagtgctatgtccaatcacagggccctagg
aggttacgacgcagctcagagcctgccatcggacacacccccggagctctgatcatccaa
tcggataagcaccatttggcgtctcgtaaagcgagctatgacgcggcgatggagggagag
gaagaggaggaggaggatgaagtgtttcaggggctcagggctctgcagctgaaagacaaa
gtgatcacaggtggagaaagaggaggggttggaactctcgggcagaggaagctgaaacac
accccaccctctcctttacgattggacgccagctgctctagcctgtcctccccagcaacc
tcccccacaggttcctcccttagttccttagactccgccttctcccaatattccacagac
tatgtcaccagcgccggcttcctgttggctgagtcttccccccgctcccccctttcaccc
cgctcccccaagtgctcacccccaaagagagatacagtggactggagtgaaagccagccc
cctcattcctcccggacaccctctacccaccacggactgcatcccaacacctggctcaag
aggaacctccgactgtcactacggcaacctgacaatggacacctggaggaggaagtgggg
aaggggaaaggggttagcctcccaaaagcctcagagtgtaaaggtgtagaggtgaccacc
aagaggaggtccagtagccctccatcctaccagcaggctatcctacagctgcagaaaagt
aggtctcccttctacagaggcacagagaaaccccttactgtcagagagctacagttgctg
cacgaccaggcttgcaatgccacccacagaccccccacaggacgtgacgtcacccagcgg
cccactggaacaggaagtgaggtcatccagcctccccaggatgtgttctatggacagagt
ggctcaacactaaccctccagaggcagaagtctcactccctcaccctggccatggaggct
ggccgcaaggtcctcaccctgcctcgcagagcctctgagccctccatggtgacagatgca
gcctccatcctcaccctggaaaggcccttggtcaagtccctgacccacggggtcaaaggt
cagcagctccctgagagcggacttagagtgtctgacattgagccacagcgcaacggagca
ggcccaaactcagagccacgcttctgcctctctccttccgccacgcgggcagtaagggac
tacttttcctcacaggagggggcggattcaggcgcgtgcctgcagaggagtcaggaggtc
gctctggcccttgtccaggggaagagggagtggcaaagcaggaagtgtagcgacccttgc
gtggacgactttgaccaaatgttctttgcagaggagtcttacgtttaa
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