Oncorhynchus tshawytscha (Chinook salmon): 112225042
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Entry
112225042 CDS
T05605
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112225042 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
otw04050
]
112225042 (edar)
Cytokine receptors [BR:
otw04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
112225042 (edar)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
SCIMP
Motif
Other DBs
NCBI-GeneID:
112225042
NCBI-ProteinID:
XP_042162804
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All DBs
Position
LG26:complement(30586513..30651048)
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AA seq
516 aa
AA seq
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MERETFCLSGGKEERDQGEATMKDRSREGVKMLQKGSQKESLFLCLLLVSCPPFLRSEYS
SCGEFEFYNQTLSSCQPCPPCQPGQEPHMNCGYGTKDEDFVCVSCPPGKYSKGKYEICRR
HKDCEGLYRATVLKPGTPDNDADCGPCLPGYYIQENRPRNLYGMVCHSCQNAPRNTKECM
LTKVVLSGKAPSVSTSSTTMFPQPHKDPTGQGHLATALIIAMSTIFIMAIAIVLIIMFYI
LKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVVIFSEKDEFDKLKPTPPKTVKSEN
DASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLLNLGTKPDHCLLSLGLLNKDKTGS
NPTSPINANNISNSNANIINNNNKATGIQSRRKKILDLYARACNVAEGLSPTELPFDCLE
KASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERISTAGYSIPDLLTR
LVQIERLDAVESLCSDVLGGGDTNTVPLSSPRCASV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagacgttctgcctcagtggaggtaaagaagagagggatcagggagaggcg
acgatgaaagacagatcacgggaaggtgtgaagatgttacagaaaggaagtcagaaagag
tctctcttcctctgtttgttattggtgtcctgtcctccctttctcaggtcagagtacagt
agttgtggagagtttgagttctacaaccagaccctcagtagctgccagccctgcccacca
tgccaacctggacaggagccccacatgaactgtggctatgggactaaggatgaggacttt
gtgtgtgtgtcgtgtccgccggggaagtactcgaagggaaagtatgagatctgcaggaga
cataaggactgtgaaggtctgtaccgtgctacagtactcaaacctgggacaccagacaat
gatgcagactgtggaccctgcttacctgggtattacatccaggagaaccggcccaggaac
ctgtatgggatggtctgtcactcgtgtcaaaatgcaccgcgcaacactaaagagtgcatg
cttaccaaagttgtgctgtcaggcaaagcccccagtgtctcaaccagcagtaccaccatg
ttccctcaacctcacaaagaccccacaggacagggtcacctagcaactgctctcatcatc
gccatgtcaaccatcttcatcatggccatcgccattgtcctcatcatcatgttctacatc
ctcaaagccaagcccagcggacaggcatgctgctctggacaggtggtgaaggcagtggag
gcacagaccaacaaacaggaggataagaaagatgttccagacaatgttgtaattttctcc
gaaaaggatgaatttgacaaactcaaacctacgcctccgaagacggtgaaaagtgagaat
gatgcatcgtcagagaacgagcagctgttgagtcgtagtatggatagtgatgaggaggca
gccttggagaggcagggggcagctgatcctaaccccagcctctgtctcctgaacctggga
accaagccggaccactgcctgctttccctggggctcctcaacaaggataagactggatcc
aaccccaccagccctatcaacgctaacaacattagcaatagcaatgcaaacatcatcaat
aacaacaacaaggctacagggattcagagccggaggaaaaagatcctggatctgtatgct
agagcctgcaatgtggctgagggtctaagtcctacagaactaccatttgactgtctggag
aaggccagtcggatgctgagctcctcctacagtagcgaggcagccgtagtgaagacctgg
agacacctggcagagagctttggcctgaagagggatgagatcggaggaatgagtgacggc
ctgcagctgtttgagaggatcagtacagccggatacagcatcccagacctgctcaccaga
ctggtgcagatagagagactggatgctgtggagtcactatgttctgatgtactgggagga
ggagatacaaacactgtccctctgtcctcaccacggtgtgcaagcgtctga
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