Oncorhynchus tshawytscha (Chinook salmon): 112225077
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Entry
112225077 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112225077 isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112225077
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other transcription factors
LRRFIP
112225077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
Motif
Other DBs
NCBI-GeneID:
112225077
NCBI-ProteinID:
XP_024244438
LinkDB
All DBs
Position
LG26:complement(4744471..4824084)
Genome browser
AA seq
1733 aa
AA seq
DB search
MGTQGTGRKRNPNKDRSTAEDDALNLISREAEARLAAKRAARAEAREIRMKELERQQKEI
YQVQKKYYGLDNKSDKVDSEWGHIEQWMEDSERYSRPTQRHTSISDDDERMSVGSRGSVR
SDLDAIGAYGRGEKDKKSKKKKKHKDKHKDRDSNGYDNEYSTISSRSSRLGDESTSRVSR
SSRLDLQPSSGLSDESISKVSRSSRLDLQPASYASSDLNSNNGLSSSRQRLSSYESSGLL
SQISYRRHHRGSLYEDSLYSGSRRVTGSSSRHSEYNSYRGSGSRASSRASSAHASPVDDD
CNSVASFLRSAATSSGLPRDLDHMTIPNLSDVDDRDYLEKGSRAASTLSAATLASLGGSS
SRGESGETSITGDTETSIREIKEIHELKDQIQDVESKYMQSLKEVKDTLVEVEEKYRKAM
VSNAQLDNEKNNLMYQVDTLKDSLMELEELLSESRREYEGKSKDFEREKHAHGVLQFQFK
EMKETLKQSEELLTEIRQMRLKQDGFVREISDLQETVEWKDKKIGALERQKEYSDAIRNE
RDELRDEVVQLKDILKKHGIVLRPDLTANGEMLELGTEESASGDPASQLAQDSQMSPMEG
GNSMLGRAQETELGSRGDKVVDPGRSRQQEDTHEEEAQENHLTSPTPCSLVGVSETETSR
EAQPFSPTLGEEVEIEGSDVNKDSDNGIPVVEVKSGPVCDSEVLVVVTGPEEEVTVAGEG
YEAAGVEGTGQGRVEVASEGEMGIKNDKADEAETKVVKSSDDTKETSSKEPTSEYGAAAE
QEENESSKDVKCLDSYPLPRETIEDTMKNGTHISQGTDLDTSKSPIKSNPELQKTKKVEA
LPEMTDLQPQAQAGNKKKKGKKKKGETQSDVKQEDHKKSTTETCVVSMTNGTQISLGTDL
DTPKTPVESNPEPQPEPQKTKKACVLPETTDMQLQSQGGKKKKKGKKKGEKQGDETQGDK
MSTTEEDVVSTPSDKEPVEAVGEGVITIETQREEGTSSSPDRELQSPEQKAQTIAEGLNL
KEEQLEEDRVEPTIEVSLTDQAKSEEVVSKKKKKKMKKDKHKPTMELEKSEGEISVLSLE
SNIGIADPVDHSKCITSAYNPMEELELTTDTGTQKDESGYTTNPDNFGDCLNSSADPKCP
LDSKQSTAGNSNNVKEEDSIKVSVEEEQTIQDSKEQGNNFHSPIVLRPELKESVEPEDLI
FHDGVATHPDQANENATQDLKEAGQDKPNGSPEERTNALEHEDTSMAMPADVEKCNNSAD
EKCCSISLDRNCPAAETIRLPEQLVDLPGCPVTDRNLYENNKPETLDAEEASNGGISTET
ELNDTETLDAEEASNGGISRETELNDTETFDAEEASNGGISRETELNDTETLDAEEASNG
GISRETELNDTETFDAEEASNGGISTETELNDAEEASNGGISTETELNDTEEASNGGIST
ETELNDAEEASNGGISTETELNDTETRLQDPVKETPVTIDSFREQSHNESGPCTMVAKAE
EQDDPIEAKLEGNKVPGPSEPWNDKEHENEGQSFDFSDLVSVVPANVFPIASQEEVSQEM
RTMSVGYKIEVELGKEKGNQEEEDDKPQDTEGVSTIVAQQSIEGGSDNAPEELRSPEEKA
QTIVEGQNVNGEQQLITLEEGVSVTHNQKDIAEEGGSVTVEQQGVGESERQQNATEVEAL
PVEEGEEAIQYGSQQGRRESSQSAEGNNEQSRTGLKKGSKKVKGKGKEDCRMS
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggggactcagggcaccggacgaaaaagaaatcccaataaggacaggtcgacggccgag
gatgatgcccttaatctcatatcaagagaggcagaggccaggctggcagcaaagagggcg
gccagggcagaggcccgagaaatccgtatgaaggagctggagagacaacagaaagagatc
tatcaggttcagaagaaatattacggcttggacaacaaatcagacaaagtagacagcgaa
tggggacacatcgagcaatggatggaggacagtgagaggtactcacgccccacacagaga
catacttcgatctcagacgatgatgagcggatgtctgtgggcagccgaggcagtgtgagg
tcggatcttgatgcaataggggcctacggaagaggggagaaggacaagaagtccaagaaa
aagaagaaacacaaagacaaacacaaagatcgtgacagcaacggctatgacaatgagtac
agtactatatccagtcggagctccagactcggtgatgagagcactagcagggtctctcgc
tcgtccagactagatctgcagccgagctccggactcagtgatgagagcattagcaaggtc
tctcgctcctccagactggacctgcaaccggcatcatatgcttcctctgaccttaacagc
aacaatggtctgtcctcttctaggcaacggctttcttcctacgagtcatccgggctactc
agccagatctcctaccggcgccatcacaggggctctttgtatgaggacagtctgtacagt
gggtctcgacgggtgaccggctccagctctcgtcattcagagtacaatagttatcgcggc
agcggttccagggcgtcctccagggccagctcagcccatgccagcccagtggatgatgac
tgcaactctgtggccagcttcctgcgcagcgcggccaccagcagtggcctgcccagagac
ctggatcacatgaccatccccaatttatccgacgtggatgaccgagattacctggaaaag
ggatctcgagccgcttccaccctatcggcagccaccctcgcctcgctgggcgggtcttcc
tcccggggagaaagtggtgaaacgtccatcactggcgacacagaaacctccatacgagag
atcaaggagattcatgagctgaaggatcagatccaagatgtggagtcaaagtacatgcag
agcctcaaagaagtcaaggataccttagtggaggtggaggagaagtaccgcaaggccatg
gtgtccaacgcccagttggacaacgagaagaacaacctgatgtaccaggtggacacgctg
aaggactcgctcatggagctggaggagctgctgtccgagtcacgccgcgagtacgaaggg
aagagcaaggactttgagcgtgagaaacatgcccacggcgtgctgcagttccagttcaag
gagatgaaggaaacactaaaacagagcgaggagttactaacagagatccgtcagatgcgt
ctcaagcaggacggctttgttagggaaatctctgacctgcaggaaaccgtggagtggaag
gataaaaagattggggccttagagcggcaaaaggagtattcggatgccatccgaaatgag
cgggatgagctcagggatgaggtggtccagctgaaagacattctgaagaaacatggaatt
gtcctcagacctgacctgactgccaatggggaaatgctggagttgggaactgaagagtca
gccagtggagatccagcttctcaattggctcaggactcccagatgtcgcccatggaaggg
gggaacagcatgcttggcagagctcaggagacggagttgggaagtagaggagataaggtg
gtggatccaggaaggtccaggcagcaagaggatacacacgaggaggaggctcaagagaac
catctgacctcacccaccccctgtagccttgttggtgtttctgaaacagaaacatcgagg
gaggctcagccattctcacccacattgggggaggaggttgaaattgaaggcagtgatgtc
aacaaagactctgacaatggcataccagtagtagaggtcaaaagtggaccggtctgtgat
tctgaggtacttgtggttgtaacaggtcctgaggaagaggttacagtagcgggggagggg
tatgaagcagcaggtgtagaggggacagggcaaggcagagtagaggttgcaagcgaaggg
gaaatgggaataaaaaatgacaaggcagatgaggcagagaccaaagttgtcaagagcagt
gacgacaccaaagagacgtcttcaaaagagcctacctcagaatatggtgcagcagctgaa
caagaggaaaacgaatcgagtaaagacgtgaaatgtttagactcatatcctctgcctagg
gaaaccattgaggacaccatgaaaaatggcacacatattagccaagggacagaccttgat
actagtaagagcccaatcaaatcaaaccctgagcttcagaaaacaaaaaaggttgaagcg
ttaccagagatgactgacctgcagccacaggcccaagcaggcaacaagaagaagaaaggc
aagaagaagaagggagaaacacaaagcgacgtaaagcaggaagaccataagaagagcaca
acagaaacgtgtgtagtctccatgacaaatggcacacagattagcctagggacagacctt
gatactcctaagaccccagtcgaatcaaaccctgagcctcaacctgagcctcagaaaaca
aaaaaggcatgtgtgttgccagagaccactgatatgcagctacagtcccaaggaggcaaa
aagaaaaagaaaggcaagaagaagggtgagaaacaaggtgatgaaacgcagggagataag
atgagcacaacagaagaggatgtggtctccaccccaagcgataaggagccagtagaggct
gtaggagagggggttatcacaatagagacacagcgagaggaggggaccagtagttcacca
gatcgagagctccaaagccctgaacaaaaagcacaaaccatagctgagggactgaacctg
aaggaagaacaactagaagaagaccgagtagagcctaccattgaagtatctctgactgac
caagctaagagtgaggaagttgtctcaaagaagaaaaagaagaaaatgaaaaaggacaaa
cacaaacctacaatggaattagagaaatcagaaggcgagatatcagtattatcccttgag
tccaacattggtattgctgatcctgttgatcactccaagtgtataaccagcgcttataac
cctatggaggaattagaattgacaacagatactggtacccaaaaggacgagtcagggtac
acaaccaaccctgataactttggagactgtttgaactcttcagctgacccaaaatgtcca
ttggactcgaaacagtccacagctgggaattcaaacaatgtcaaagaggaagattcaatc
aaggtctcagttgaagaggaacaaacaatccaagactcaaaggaacaggggaataacttt
cacagtcccatcgtcctaagaccagagctcaaggagagcgtggaacctgaagaccttatc
ttccatgatggtgtcgctactcacccagaccaggctaacgaaaatgcaacacaagaccta
aaagaggcaggtcaagataaaccaaatgggagcccagaagagcgtacaaatgcacttgaa
catgaagacacttcaatggcaatgccagcagatgtagagaaatgcaacaattcagcagat
gagaaatgttgtagcatatcgcttgaccgcaactgccctgctgctgagaccataagactg
cctgaacaattggtggatctacctggttgtccagtcactgacaggaacttgtatgaaaac
aacaagccagaaacacttgatgcagaagaggcatcaaatggagggatctctacagagacc
gagctgaatgatacagaaacacttgatgcagaagaggcatcaaatggagggatctctaga
gagaccgagctgaatgatacagaaacatttgatgcagaagaggcatcaaatggagggatc
tctagagagaccgagctgaatgatacagaaacacttgatgcagaagaggcatcaaatgga
gggatctctagagagaccgagctgaatgatacagaaacatttgatgcagaagaggcatca
aatggagggatctctacagagaccgagctgaatgatgcagaagaggcatcaaatggaggg
atctctacagagaccgagctgaatgatacagaagaggcatcaaatggagggatctctaca
gagacagagctgaatgatgcagaagaggcatcaaatggagggatctctacagagaccgag
ctgaatgatacagaaacacgactacaggaccctgtaaaagaaactccggtgacaattgac
tcttttagggaacagagccacaatgaaagtggaccatgcactatggtggctaaagcagaa
gagcaagatgatcccattgaggccaagctggagggtaacaaggtacctggacccagtgag
ccgtggaatgacaaggagcatgaaaatgagggtcaatcgtttgacttttctgacctagtt
tcagtggttcctgcaaatgtattcccaatagcatcccaagaggaggtcagccaggaaatg
agaactatgtcggtaggatacaaaatagaggtagagcttggtaaagagaagggtaaccag
gaagaggaggatgacaaaccgcaggacacagagggagttagcacgatagtggcacagcaa
tcaattgaaggggggtcggataatgcaccagaggagctccgaagccctgaagaaaaagca
caaaccatagttgagggccagaacgtgaatggagaacaacaactaatcacattagaggag
ggggttagtgtaacacacaaccagaaagacattgcagaggagggagggagtgtgactgtt
gaacagcaaggtgtaggggagagcgagaggcagcagaatgcaactgaggtagaggctttg
ccagtagaggagggggaagaggcaatccagtatgggtcacagcagggtagaagagaaagt
agtcagagtgcagagggcaacaacgagcaatctaggacaggcttgaaaaaaggcagtaag
aaagtaaaaggcaagggaaaagaggactgccgaatgtcctag
DBGET
integrated database retrieval system
