Oncorhynchus tshawytscha (Chinook salmon): 112225089
Help
Entry
112225089 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112225089
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112225089
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112225089
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112225089
Protein phosphatases and associated proteins [BR:
otw01009
]
HAD phosphatases
Fcp/Scp phosphatases
112225089
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112225089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
112225089
NCBI-ProteinID:
XP_024244487
LinkDB
All DBs
Position
LG26:complement(5869570..5905772)
Genome browser
AA seq
1152 aa
AA seq
DB search
MPAEHCEVSELIEAMDSSEPSEQSAEHCIIVDERKNSLDYTEPQKVNGQMDSSVHSADHY
NMNVEHAEESKPSVHYNRHSEGFEQWINQPCEDYPALHKHTNQCKSSELSKSFEECTQHC
ECFEFSKSSEHCANDCLASVFRQHCENCTGHFQSSEQCKPSDQHCMSFEPSEPAESSEFF
EQCKIYDFIPDISESTKSIRSFEHCTGFCGYSGKYNNIEHPTEYNETTTSYNDDLNPAEP
TVQQIEICGLFDSEFCTTLEPIHSSDLNMPSQHYAEQVDPNESRHVSKVCEPTEQTLLAE
QCSHLSAEYDIPSGHCELQNNLYEQSETSVQCELTERCNSCESYTSQHPSINNKYYEPSN
AFYSEEDKSSECSSIETSYLEFCIDDCINSDLLTDSAESYEALVEEGAPDKSRDDKAKFC
SEIWGSFDSCPDAVECEESKADEEKPHLDAVVEEFFDLFDKKDTYTFSQRRPYTSCFEGG
GVHEQIFEQLKPQVPIMNEEETHMPCAKKRLESLALDEKINENKAFSQEEVDQSYDACAE
DRPFHVDCADDEASASGSFAEEERCESCFEEASANEVDVYEAFVAEDNAIKAEAHKPFVE
EDCIAEDKAGEVHANGHLVDEDNMYEHSAEEASHGSSAEVSFVEDDETYEGQNDQTYEPC
FEKEKSFDEEDQKIRIAEDELYIPYARDKAYRLYELCDEDCIAYGCEHTPFSMEGEAYAL
CAEEKACEPSDEEHHEYESKANESSVNPFCDEEDSDDTFNEGIDDSTPETYFKDGVCTED
GEHAAPCAEESECPNSLEVITKDTILCTEGSKPAMPDGIEFNGDQTDSSTTSSEEIDEQN
KSSKLCEDLNTPYMSEGWEEHNVVSEYLQPPESEDLSEQVSEKTSPPFDGAEHSKNSMVS
EPDEHHAEQTEPAEKSELDEKTELHEFFKIVASEQPSEESDEELNDDESEESCECEYCVP
PSDQVPEKPLLPQIKSKDAGKICVVIDLDETLVHSSFKPLNNADFIIPVEIDGTVHQVYV
LKRPHMDEYLRRMGELFECVLFTASLSKYADPVSDLLDKWGAFQHRLFRESCVFHQGNYV
KDLSRLGRDLNKVIIVDNSPASYIFHSDNAVPVASWFDDMADTELLDLIPFFERLSKVDD
VYDTLKQQRTAS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaacactgtgaggtgtcagaactaattgaagccatggattcaagtgagcct
tctgagcaatctgctgaacactgcatcattgtggacgaaagaaaaaactctttggactat
actgaaccccaaaaggtcaatggacaaatggattcctctgtgcacagtgccgatcattac
aacatgaatgtagaacatgcagaggagagtaaaccttctgtgcattataataggcattct
gagggctttgaacaatggatcaaccagccctgtgaggactatccagctcttcacaagcac
actaatcagtgtaagtcttctgagttaagtaaatcatttgaagaatgtactcaacattgc
gagtgctttgagttcagcaagtcctctgagcactgtgctaatgactgtctagcttctgtc
tttaggcaacactgcgaaaattgcacaggacactttcagtcatctgaacaatgcaagcct
tctgatcaacactgtatgtcctttgagccaagcgaacctgctgagagctctgagtttttt
gagcaatgtaagatatatgacttcatacctgacatctctgaatctactaaatcaatcaga
tcatttgagcactgcactggtttttgtgggtattcaggaaaatacaataatattgaacat
ccaacagaatataatgagactacaacgtcatataatgatgatttaaatcccgctgagcct
acagttcaacaaattgaaatctgtgggctttttgactctgagttttgcacaacattagaa
cctatacattcttcagatttgaacatgccttctcaacactatgctgaacaagttgatccc
aatgaaagtagacatgtctctaaagtttgtgaacccactgagcaaacgttgcttgctgaa
caatgcagtcatctatctgctgaatatgatataccctctgggcactgtgaactgcaaaac
aatctctatgagcaaagtgagacaagtgtacagtgtgaactgactgagcgatgtaattct
tgtgagagctataccagtcaacatccaagcataaataacaaatactatgagcctagcaac
gcattttattctgaggaagacaagtcttctgagtgctcatccattgaaacaagttattta
gaattttgcatcgatgactgtataaattcagacctattaactgattcagctgaatcctat
gaagcattagtggaagaaggagcaccagacaaatccagggatgataaagctaaattctgt
tcagagatatggggatcttttgacagttgtccagatgcggtagaatgtgaggaaagcaaa
gctgatgaagaaaaacctcacttggatgcagtcgttgaggaattctttgacttattcgat
aaaaaggatacttataccttttctcaaaggcgaccttatacctcctgttttgaaggggga
ggggttcatgagcagatttttgaacaacttaaacctcaagtgcccattatgaatgaggaa
gaaacacatatgccctgtgccaaaaaaaggcttgaatcacttgctttagacgagaaaatc
aatgagaataaagcttttagtcaagaagaagttgatcaatcttatgatgcttgtgctgag
gacagaccatttcatgtagactgtgctgatgatgaggcatcagcctctggatcttttgca
gaggaggaaagatgtgaatcttgttttgaagaagcctcagctaatgaagttgacgtttac
gaagcttttgtagcagaagacaatgctattaaggctgaggcccacaagccctttgttgag
gaagattgcattgctgaagataaagctggtgaggttcatgccaatggacacttagttgat
gaggacaacatgtacgaacacagtgcagaggaagcttctcatggatcctctgctgaagtg
tcttttgttgaagatgatgaaacatatgagggccaaaatgatcagacttatgaaccatgc
tttgaaaaagagaaatcttttgatgaagaagaccagaaaatacgcattgccgaagatgaa
ttatacatcccatatgctagagacaaagcttatagattatatgaactgtgtgatgaagat
tgcatcgcatatggctgtgaacatacaccattttccatggaaggggaagcttatgcactc
tgcgctgaggagaaagcctgtgaaccaagtgatgaagagcaccatgaatatgaaagcaaa
gccaatgaatctagtgttaatcccttctgtgatgaagaagactctgatgatacttttaat
gaaggaattgatgacagcactcctgagacatattttaaagatggagtgtgcactgaggac
ggagagcatgctgctccatgtgctgaggagagtgaatgtccgaactcacttgaggttata
accaaagacactatactatgcactgaaggaagcaaaccagctatgcctgatggtattgaa
ttcaatggagatcaaactgattcctctacaacctcttcggaagagatagatgagcaaaac
aagtcatctaaattgtgtgaggatctgaacacaccatatatgtctgagggctgggaggaa
cacaatgttgtctcagagtacctccaacccccagagtccgaggacctttcagagcaggtg
tctgagaaaacaagccccccttttgatggtgctgaacatagtaaaaactccatggtcagc
gagccagatgaacatcatgccgaacaaacagagcccgctgaaaaaagtgagctggatgag
aaaacagagttgcatgaattttttaagattgtggcctctgaacaaccaagtgaagagtct
gacgaggagctgaatgacgatgagtctgaggagtcctgtgaatgcgagtactgcgttccg
cctagcgaccaggtcccagaaaaacctttgctccctcaaatcaagtcaaaagacgcaggg
aagatctgtgtggtgattgatttggatgaaacattagtgcacagttcattcaagccattg
aacaacgctgattttataattccagtggaaatcgatggaacagttcaccaggtgtatgtg
ttgaagcgaccccatatggatgagtatctcagaagaatgggggagttgtttgagtgtgtt
ctgttcactgcgagtttatccaagtatgccgatcccgtctccgacctgctggataaatgg
ggtgccttccaacaccgtctcttccgggagtcctgcgttttccaccaaggaaactatgtg
aaagacctgagtcgtctgggcagggacctcaacaaggtcatcattgtggacaactctcca
gcctcctacatcttccactctgataatgctgtccctgtagcatcctggtttgatgacatg
gctgacacagagctactagatctcatcccgttcttcgagagactaagcaaagtggacgat
gtctacgatacgctcaagcagcagaggactgcaagctag
DBGET
integrated database retrieval system
