Oncorhynchus tshawytscha (Chinook salmon): 112225107
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Entry
112225107 CDS
T05605
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112225107
09144 Cellular community - eukaryotes
04530 Tight junction
112225107
09142 Cell motility
04810 Regulation of actin cytoskeleton
112225107
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112225107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225107
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112225107
04147 Exosome [BR:
otw04147
]
112225107
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Arp2/3 complex
112225107
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112225107
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112225107
Exosomal proteins of other body fluids (saliva and urine)
112225107
Exosomal proteins of bladder cancer cells
112225107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
112225107
NCBI-ProteinID:
XP_024244528
LinkDB
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Position
LG26:8242772..8264535
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AA seq
414 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGSRTVKGVDDLDFFIGD
EGIDKPNYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE
YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY
VIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFNK
YDTDGSKWIKQYTGINNISKKEFTVDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVI
QNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKPID
VQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgattaccggcgtgtgttgtcgactgcggtacaggatacactaagctgggg
tatgcggggaacacagagccacagttcattgttccgtcatgtattgcaatcaaagagtcg
gccaaggttggatcaaggacggtcaagggggtggacgacctggacttcttcatcggagat
gaggggatagacaagcccaattatgccacaaagtggcccatccgtcatggcattgtcgag
gactgggacctgatggagaggttcatggaacaggtgatcttcaagtacctgagggcggag
cctgaggaccactactttctgttgacagagcctcctctgaacacaccagagaaccgagag
tatacagcagagatcatgtttgagtccttcaacgtcccagggctctacattgcagtgcag
gctgtcctggcgctggctgcctcctggacatccagacaggtgggggagaggacactgacg
gggacggtcatcgacagcggagatggagtcacccacgttatccctgtggctgagggctac
gtcatcggcagctgtataaagcacatccccatcgcgggtcgtgacatcacctacttcacc
cagcagcttctgagggagcgggaggtgggcatccccccagagcagtccctggaaacggcc
aaggcagtcaaggagcgtttcagctacgtgtgtcctgacctagtgaaagagttcaacaag
tacgacacggatggctccaagtggatcaaacagtacactggaattaacaacataagcaag
aaggagttcactgttgacgtgggctacgagcgtttccttggccctgagatcttcttccac
ccagagtttgccaatcctgacttcacccagcccatctctgaagttgtggacgaggttatc
cagaactgccccattgatgtcagacgtcctctttacaagaacattgtcctgtcaggcggc
tccaccatgttcagggactttgggcggcgcctgcagagggacctgaagaggactgtggac
gccaggctgaagatgagtgaggagctgagtgggggcaagctcaagcccaaaccaattgat
gtgcaagtcatcactcatcatatgcagagatatgcagtgtggttcggaggatccatgtta
gcctcaactcctgagttctaccaggtatgccacaccaaaaaggactatgaggagattggg
cctagcatctgtcgtcacaaccctgtgttcggagtcatgtcttaa
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