Oncorhynchus tshawytscha (Chinook salmon): 112225120
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Entry
112225120 CDS
T05605
Symbol
itgb2
Name
(RefSeq) integrin beta-2 isoform X1
KO
K06464
integrin beta 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04514
Cell adhesion molecules
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112225120 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112225120 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112225120 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225120 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112225120 (itgb2)
04515 Cell adhesion molecules [BR:
otw04515
]
112225120 (itgb2)
04090 CD molecules [BR:
otw04090
]
112225120 (itgb2)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
112225120 (itgb2)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112225120 (itgb2)
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112225120 (itgb2)
CD molecules [BR:
otw04090
]
Proteins
112225120 (itgb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
112225120
NCBI-ProteinID:
XP_024244541
LinkDB
All DBs
Position
LG26:9923262..9948178
Genome browser
AA seq
785 aa
AA seq
DB search
MTLEMYPCVSLLLLLMGRGAIPLVLSEEVKLCSKTVINSCSDCIKSGAYCTWCKQLNFIK
PGEQEAARCDTWAQLIERGCMEEDIISPKNYFSSSKNISLSNTALDKGEPIQLRPQEVNL
KLRPGLPHTFTLDFQRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNKLFNALQGITKKGQ
IGFGSFVDKTVLPFTNTNPEKLNKPCAETEMYCQPAFGYRHVLSMTGNKAEFESEVNKQR
ISGNLDSPEGTLDAIMQAAVCGERIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDE
RCYMDNNLYSKSNEMDYPSVGQVANQLEKNNIQPIFAVTKNMEKVYRELSKMIPKSEVGV
LSADSHNVVELIKNAYNRLSSKVTVTHDALPDNVRVTYTPLCPEGGPSGDKGVCNNVGVG
QMVSFNVTVTADECMQSEISFLIGPLGMKDKLKVSLSTLCKCECNDPVTVDSPYCNGKGQ
VNCGMCSCKAGFVGQKCECSIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYTLPGG
STYYGTNCECENESCEKFQNKLCGGNGKCRCKNCECKPGYEGTACQCKKSDEQCRTPSGS
VCSGRGTCKCNQCKCMEGYQRPYCLTCPACQTTCITKGKCIECLGFQTGPFSKNCSQACT
SISEFKMVETLPPGKPCDVRDVESCRVFFAIKQLDGEDNYTAQILKTRECPKLPNIYAII
GGSIVGVTVIGILILLFIKVLFTLQDLKEYRKFMNEAQKTRWSENKNPIFQEATTTVANP
TFSGE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgaaatgtatccgtgtgtgtctctcctgctcctgctgatgggcagaggtgcc
attcccctagtgctctctgaggaggtgaaattatgttccaaaacagtgatcaactcctgc
agtgactgcatcaaatcaggagcgtactgcacgtggtgcaaacaactgaacttcatcaaa
ccaggggagcaggaggcagctcgctgtgacacctgggctcagctcatagaaaggggctgc
atggaagaagacatcatatctcccaagaattacttttcttcttctaagaacatctccctg
tccaacactgcattggacaagggggaacccatccagctccgtcctcaggaggtcaatctg
aagctcagaccaggactgcctcatacattcacgctggactttcagagagtggagggctat
cctgttgatctctactacctgatggatctctcctactccatggaggatgatttgaggagc
atcaagactctgggaaacaaactgtttaacgctctgcaaggcatcacaaaaaaaggacaa
atcggttttggctcttttgtagacaagactgtcctgccgttcaccaacaccaacccagag
aagctgaataagccatgcgccgaaacagagatgtactgccaacctgcttttggctacaga
catgttcttagcatgacgggaaacaaagctgagtttgagagcgaggtcaacaagcagcgg
atctctgggaacttagactcccctgaagggacgctggacgccatcatgcaggctgcagtc
tgtggggaaaggattggctggaggaatagcagcactcggcttatcgtcctgaccaccgac
gatggcttccacatggcaggggatggcaagctggctggcatactggagcccaatgatgag
agatgttacatggacaataacctgtacagcaagagcaatgaaatggactacccatctgtt
ggtcaagtggctaatcagttagagaagaacaacattcagccaatctttgctgtgacgaag
aacatggagaaggtatacagggaactcagtaaaatgatccccaagtctgaggtgggagtg
ttgtccgctgactcccataatgtcgttgaactgatcaaaaatgcctacaacaggctctcc
tccaaagtgacggtgactcatgatgctctccctgacaacgtgagagtcacttacactcca
ctctgtcctgaagggggaccctcaggggacaaaggagtgtgtaacaatgtgggagtggga
cagatggtgtctttcaatgtaacagtgacagcggatgaatgtatgcagagtgaaatttct
ttcctgattggtccgttgggtatgaaggacaagctgaaggtgagcttgtcgactctctgc
aagtgtgagtgtaacgaccctgtgacggtcgattccccgtactgcaacgggaagggccaa
gtcaactgtggcatgtgcagttgcaaagccggcttcgtgggccagaagtgtgagtgctcc
atcggggagaaggacgagagctctctgagagcggcgtgccggaaggacaacggcacggag
tgtgaaggacgaggggactgtgtgtgtggcatttgccagtgctacaccttaccaggtggc
agcacctactacggcacgaattgcgagtgtgaaaacgagagctgcgagaagttccagaac
aaactgtgtggagggaacggaaaatgccgttgcaaaaattgcgaatgcaaacccgggtac
gagggcaccgcctgccaatgcaagaagtcggacgagcagtgtcgcacaccaagcgggagt
gtgtgcagcggcaggggcacatgcaagtgtaaccagtgcaagtgtatggagggctaccag
cggccctactgtctgacctgtcccgcctgccaaaccacctgtataaccaaggggaaatgc
attgagtgtctgggctttcagacaggcccattcagtaagaactgctcccaggcctgtacg
agtattagtgaattcaagatggtggagacgttgccacctggtaagccttgtgatgtgagg
gatgtggagagctgccgggtgttctttgccattaaacagttggacggagaggacaactac
accgcccaaatactaaagaccagagagtgtcccaagttgccaaacatctatgccatcatt
ggaggctccatcgtaggcgtgactgtcatcggaatcctgatcctgctcttcatcaaagtc
ctcttcacattgcaagacctgaaggagtaccgcaagtttatgaatgaggcgcagaaaacc
aggtggtcagagaataagaatccaatattccaggaggcaaccaccaccgtggctaaccct
acctttagtggagaataa
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