Oncorhynchus tshawytscha (Chinook salmon): 112225134
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Entry
112225134 CDS
T05605
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00100
Steroid biosynthesis
otw01100
Metabolic pathways
Module
otw_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112225134 (lss)
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
112225134 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
DUF7374
Motif
Other DBs
NCBI-GeneID:
112225134
NCBI-ProteinID:
XP_042162563
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Position
LG26:10169801..10183263
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AA seq
737 aa
AA seq
DB search
MMTEGTCLRRRGGPYKTEPATDLTRWRLSNTEGRQTWRYVEDQDTSDREQTMLEAHSLGL
DTSKFIPGSPSAHTAVESALKGMAFYSQLQAEDGHWAGDYGGPLFLLPGLLITCHITQIP
LPEAWKKEMVRYLRSVQLADGGWGLHIEDKSTVFGTALSYTTLRILGVGPDDPDMVRARN
NLHNKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWFPAHPSTLWCHCRQVYL
PMSYCYAVRFAAKEDPLVLSLRQELYVQDYATINWPGQRNNVAACDMYTPHSTLLTVAYM
VMNVYEAHHSGSLRGRAVKELYDHIQADDRFTKCISIGPISKTINMLVRWHVDGPSSAAF
QEHVSRIPDYLWLGLDGMKMQGTNGSQLWDTAFAAQAFLEAGAQDSPRLEECLKHAHQFL
TTTQIPDNPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEHCPFISQQV
PSERLFDSVNVLLSMRNRDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVM
QALRHFQHVYPEYRIEEIRSTLREGLEYCRKVQRPDGSWEGSWGVCFTYGVWFGLEAFAC
MGHTYHDGGGVCKEVQSACDFLVAHQMEDGGWGEDFESCEQRRYVQSANSQIHNTCWALL
GLMAARYPDAQVIERGIQLLVDKQMPNGDWPQENISGVFNKSCAISYTSYRNVFTVWTLG
RFFNLFPSSPLAGKVKL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgagggaacatgccttcgtaggaggggggggccgtacaagaccgagccagcg
acagacctgacccgctggaggctgagtaacacagagggcaggcagacatggcgctatgta
gaggatcaagacacatcagacagggagcagactatgcttgaagcccattcacttggtttg
gatacgagtaaattcatccctggctctccctcagcccacactgcagtggagtcagccctg
aagggcatggcattctacagccagctccaggcagaagatggccactgggcaggagactac
ggaggacccctcttcctgctaccaggtctcctgatcacctgtcacataacccagatccct
ctccctgaggcctggaagaaggagatggtgagatacctgcgctctgtccagctggctgat
ggaggctggggcctacacattgaagacaagtccacagtgtttggcactgccctcagctac
accaccctgaggattctgggagtgggaccggatgacccggatatggttagggccaggaac
aacctgcacaacaaaggaggcgcggttggcatcccctcctggggtaaattctggttggcc
atcctcaatgtgtacagctgggaaggaatgaacacgctcctcccggagatgtggctgttc
cctacctggttccctgctcacccatccactctctggtgccactgtcgccaggtctacctt
cctatgagctactgctacgctgtcaggtttgctgccaaggaggaccccctggtgctcagc
ctcagacaggagctgtatgtccaggactatgccaccatcaactggcctggtcagcggaac
aatgtggcagcatgtgacatgtacacaccacacagcacgctactcaccgtggcttacatg
gtcatgaacgtgtatgaggcccaccacagcggcagtctacgaggaagagcggtcaaagag
ctgtacgaccacatacaggctgacgaccgtttcaccaagtgcatcagcatcggcccaatc
tccaaaacgatcaacatgctggtgcgctggcacgtggacggaccctcctccgctgccttc
caggagcacgtgtccaggatcccagactacctctggctgggattggatggtatgaaaatg
cagggaaccaatggatcacagctatgggacacggctttcgcagctcaggcgttcctagag
gcaggggctcaggacagccccaggttagaagagtgtcttaaacacgcccaccagttcctc
accaccacacagataccagacaaccccccagaataccagaaatactacagacagatgaac
aagggagggttccccttcagcacgcgggactgtggctggatcgtggccgactgcacggca
gagggcctaaagtcagtaatgcttctgcaggaacactgtcccttcatcagtcagcaagtc
ccctcagagcgcctgtttgactccgtcaatgtgttgctaagcatgagaaacagagacggt
ggttttgccacttatgagaccaagcgaggagggagactgttggagctactcaacccctca
gaggtgtttggtgacatcatgatagactacacctatgtggagtgcacctcagcagtcatg
caggctctgagacacttccagcacgtgtaccctgaataccggatagaggagatccggtcc
actctgagagaaggattggagtactgccggaaggtgcagaggcccgatgggtcatgggaa
ggatcctggggagtgtgcttcacctatggggtctggttcggcttggaggcctttgcctgc
atgggtcacacctaccatgatggcggtggtgtgtgtaaggaggtgcagagtgcctgtgac
ttcctggtggcccaccagatggaggatgggggctggggtgaggactttgagtcctgtgag
cagcgtcgctacgtgcagagtgctaactcccagatccacaacacctgctgggccctgctg
ggcctcatggctgctaggtacccagatgcacaggtgattgagagaggaatacagctgttg
gttgacaagcagatgcccaatggagactggccacaggaaaacatctcgggagtattcaat
aagagctgtgccatcagctacacttcctacaggaacgtcttcaccgtgtggacgctggga
cgcttctttaacctcttcccctccagccctctggccgggaaggtgaagctgtga
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