Oncorhynchus tshawytscha (Chinook salmon): 112225210
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Entry
112225210 CDS
T05605
Symbol
colq
Name
(RefSeq) acetylcholinesterase collagenic tail peptide isoform X1
KO
K26586
acetylcholinesterase collagenic tail peptide
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112225210 (colq)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112225210 (colq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF4215
SGL
Motif
Other DBs
NCBI-GeneID:
112225210
NCBI-ProteinID:
XP_042174436
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MILITFGLYLPLLFCYVLSQSSFLDNILSFPAALQQQPAVDQQRKFNPCCLLSPPPPPLF
PPPPSLWHPGGHNEETSTGGNHRPDPDTGTELKGPSCVPGPPGPNGPPGPQGPAGLPGLT
GPKGEKGELGRPGQKGRTGPPGLPGRQGPAGWPGPNGPKGEKGDGGLMGIPGARGPLGPK
GLPGYKGEKGSRGDRSERGMKGDKGTMGFPGMLGQKGEMGPKGEPGISGNRGPTGRPGKR
GKQGGKGDNGIIGPLGPAGPQGSPGHPGPPGLPASGLYVVGTKGERGLPGLPGPCSCNSI
SVKSPQFDEHSSRSDYAKVPAIFVVNSQEELDGLHTDNALAFRKDQRSLYFKDTSGWLPI
QTSFFQLTPFQSTENAPEQEGYCGDGIVQIPNGEECDDGNRIVTDGCVKCKHAYCGDGYR
YDGAEECDGKDFGYQTCNSYLPGSYGRLRCTPYCVIDSTNCKYFT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccttatcacatttggactctatcttccactattgttttgttatgtcttgtctcag
tcctctttcctggacaatattctctcattcccagcagctctccaacaacaacctgccgtg
gaccagcagaggaaattcaacccctgctgtttactgagtccacccccgccccccctattc
cctcctcctccctcactgtggcaccccggtggtcataatgaggagaccagtacgggaggt
aatcacagaccagatccagatacagggacggagctgaaagggcccagctgtgtcccaggc
ccccctggccccaacggaccccccggtcctcagggtccagctgggctaccaggtctgacg
ggaccaaaaggtgaaaagggagaactgggacgacctggacaaaagggtcggacggggcct
ccaggtctcccggggcgccagggaccagccgggtggccaggaccaaatgggcccaagggg
gagaagggagatggtggattgatgggaatacctggagcaagaggacctcttggacctaag
ggtttacctggatacaaaggagaaaagggttcccgtggtgaccgtagtgagagagggatg
aagggagacaagggcacaatgggcttccctggaatgcttggacagaaaggggaaatgggt
ccaaagggagaacctggaatatcagggaatagaggaccgacgggcagaccagggaagagg
ggcaaacagggagggaagggcgacaatgggattattggccctctaggtccagcaggtcct
caggggtccccaggccaccctggtcccccaggtctcccagcctcaggactctacgtggtt
ggaacgaaaggtgagagggggctaccaggtcttcctggaccttgcagctgtaactccatt
agtgtgaagagtccacagtttgatgaacatagttccaggagcgactacgccaaagtgcca
gcgatatttgtggtaaacagtcaagaagaactagatggtcttcatacggacaatgcccta
gccttccggaaagaccagagatcgctttacttcaaagacaccagcggatggctgcccatt
cagacttctttcttccagctgacgccgttccagtctacggagaacgctccggaacaggag
ggttactgtggcgacgggatcgttcagatccccaatggggaggaatgtgacgacgggaat
aggattgtcaccgacggctgcgtcaagtgtaaacatgcttactgtggagatggttatcgc
tacgatggggccgaggaatgtgatggaaaggactttggctatcagacatgcaactcatat
ctcccagggtcttatggtcgtctcagatgcactccgtactgtgtcattgactctacaaac
tgcaagtatttcacatga
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