Oncorhynchus tshawytscha (Chinook salmon): 112225212
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Entry
112225212 CDS
T05605
Symbol
abcb11a
Name
(RefSeq) bile salt export pump isoform X1
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112225212 (abcb11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112225212 (abcb11a)
04147 Exosome [BR:
otw04147
]
112225212 (abcb11a)
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
112225212 (abcb11a)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112225212 (abcb11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
AAA_29
Rad17
AAA_7
AAA_15
AAA_21
Zeta_toxin
MavL-like
Motif
Other DBs
NCBI-GeneID:
112225212
NCBI-ProteinID:
XP_024244709
LinkDB
All DBs
Position
LG26:complement(14080880..14095034)
Genome browser
AA seq
1364 aa
AA seq
DB search
MARISEESLTGRQNRPSEDVPVRVKATKMKDPIYLKKVTSLQEDTDREYCRTKPDREEEN
EKGDGKKKEKLLDVGFFQLFRFATWKDTLMMVVGGLCALVHGAASPLMLLVYGMMTNTFV
AYELEVQELADPNKTCINNTITWINGSIFEIAENTTVFCGVDIEAQMTMFAYYYVGIGLG
VLIVSYFQIALWVSAAARQIQRIRKTYFRKVMRMEIGWFDCNSVGELNTRISDDINKINN
AIADQVSIFIERISTFIFGFMVGFIGGWKLTLVVIAVSPLIGLAAGLMAMAVARLTGREL
QAYAKAGSVADEVLSSIRTVAAFGGEDKEVERYDKNLIEAQNWGVKKGTIIGVFQGYLWC
IIFLCYALAFWYGSKLVIETKELSPGTLIQVFFGVLMAAMNLGQASPCLEAFASGRAAAK
TIFDTIDREPEIDCFSEKGHKLDKVTGDIEFHNVTFNYPSRPDVKILDSLSMLIRAGETT
AFVGPSGSGKSTTVQLFQRFYNPKEGMLTLDGHDIRSLNIQWLRSLIGIVEQEPVLFATT
IADNIRYGRPGVTMDDIIQATKEANAYNFIMDLPQRFDTLVGEGGGQMSGGQKQRIAIAR
ALIRNPRILLLDMATSALDNESEAIVQEALDKARMGRTTITIAHRLSTIRNADVIIGFEH
GRAVESGTHNDLLEKKGVYFTLVTLQNQGNDMPSVKTNTGPDNETIEEEILQSFSRGSYE
SGLRQSLRLRSHTQLSNELIPDAITGSIRIKSDKFLAIMENEMEPQRSKQSKEEAEERVE
PAPVARILKYNKSEWPYMLLGSIGAAINGSVNPIYAILFSQILGTFSIRDLDEQRAQING
ICILFCAVAVTSFFSQFLQGYAFGKSGELLTRRLRKVGFQAMLKQEVGWFDDPRNSPGAL
TTRLATDASMVQGATGSQIGMIVNSLTNIGASFIIAFSFSWKLSLVVVCFLPLIGLSGVF
QAKMLTGFANEDKKAMEAAGQVSSEALANIRTIAGLCKESTFVETYEQQLEAPYKSAKKK
ANIYGICFAFAQCVIFMAYAASFRYGGYLVSSERLHYLVVFRVISAIVISGTALGKASSF
TPDYAKAKIAAAQFFKLLDRVPKISMSQIDGEKWDDFKGELEFINCKFTYPTRPDIQVLN
GLLVSVKPGQTLAFVGCSGCGKSTSVQLLERFYDPDEGRVLIDGRPSHTVNVPFLRAQIG
IVSQEPVLFDCSIAENIQYGDNTRRMSMEEIVDAAKKAYLHDFVMTLPDKYETPVGAQGS
QLSRGQKQRIAIARAIVRNPKILLLDEATSALDTESEKTVQAALDEARRGRTCIVIAHRL
STIQTADIIAVMSQGAVIERGTHEELMAKRAAYYKLVTTGAPIS
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggctaggatatcagaggagtccttgacaggaagacaaaacagacccagtgaggatgtg
cctgtcagagttaaagctacaaaaatgaaggatcctatttacttgaaaaaggtcacttct
ctacaggaggacacagacagagaatattgccgtacaaaaccagacagagaagaagagaat
gaaaaaggagatggaaagaaaaaagaaaagctcttggatgttggattctttcaactgttt
cgatttgcaacatggaaggacacactgatgatggtagtggggggcttatgtgcactagtc
cacggggcagcctcccctctcatgctcttggtgtatggcatgatgacgaacacctttgtg
gcatacgagctagaggtccaagaactggcagaccccaacaaaacctgcattaacaacacc
atcacctggatcaatggctccatatttgaaatagcagagaacacaacggtcttctgtggg
gtggatattgaagcacagatgaccatgtttgcatattactatgttggtattggattagga
gtcttgattgttagttatttccaaatcgccctctgggtgtctgctgctgccagacagatc
cagagaatcaggaagacttactttaggaaggtgatgcgaatggagattggctggtttgac
tgcaattcagttggagaattaaacaccaggatatcagacgacatcaacaagatcaacaat
gcgatagctgaccaggtgtctatcttcattgagaggatctccactttcatctttggcttc
atggtggggttcatcggaggatggaagttgaccctggtggtcatcgcagtaagcccacta
ataggacttgcagctggactaatggccatggctgttgccagactgacaggtcgggagctc
caggcttatgccaaggcagggtcagtagctgatgaggtactgtcatccatcagaacagtg
gcagcctttggaggggaggacaaggaggttgaaaggtatgacaaaaaccttattgaggct
cagaactggggtgtgaaaaaggggacgatcattggagtgtttcaaggatacctgtggtgt
atcatcttcctctgctatgctttggcattctggtatggctcaaaactggtcatcgaaacc
aaagagctatcccctggtactctcatccaggtattctttggagttctcatggcagctatg
aacctgggtcaggcctcaccatgcctggaagccttcgcctcaggtcgagctgcagccaag
accatcttcgataccattgatcgagagccagaaatcgattgtttctcggagaagggccac
aaactagacaaggtcacgggtgacattgaattccacaacgtcacatttaactacccctct
aggccagatgtgaagattttagattctttgagcatgctgatcagagcaggagaaaccaca
gcttttgttgggccaagcggatcagggaagagcaccacagttcaactctttcagcgattc
tacaaccccaaggaaggaatgttgactttggatggccatgacatccgcagcctgaacatc
cagtggcttcgctccctgattggtatagtagagcaagagccggtgctgttcgccacgact
atcgctgacaacatccgctacgggagacccggggtcaccatggacgacatcatccaggcc
accaaggaggctaacgcctataactttatcatggacctcccgcagaggtttgacacgctg
gtgggtgagggtggtggtcagatgagtggaggacagaagcagaggatcgctattgcccga
gctctgatccgcaaccccaggatcctgctgctggacatggctacctcggctctggacaac
gagagtgaggccattgtacaagaggcgcttgacaaggctcggatgggcaggacaaccatt
accatcgcccaccgcctctccactatccgcaatgctgatgtcattattggctttgagcac
ggaagggcagtggaaagcggtacacacaatgatcttctagaaaagaagggggtctacttt
actctcgttacacttcagaaccaaggaaatgacatgcccagtgtcaaaacaaacacaggt
ccggacaatgaaaccattgaggaagaaatccttcagagtttcagtcgaggaagctacgaa
tctgggttgaggcaatctcttcgcctgcgatctcacacccagctgtcaaacgaactcatc
cctgatgccataactggcagtatccgaattaaatcagacaaattccttgccataatggaa
aacgagatggaacctcaaaggtcaaagcagtccaaggaggaagcagaggaacgtgtggag
ccagcaccagtggctcgaatcctgaagtacaacaagtcagagtggccctacatgctattg
ggatctataggagctgccatcaacggctccgtcaatccaatctatgctatcttattcagc
cagatccttgggacgttctctatacgtgacttggatgaacagagagcgcagatcaatgga
atatgtatcctgttctgcgctgtggcggtgacaagtttcttctctcagttcttacagggc
tatgcatttggaaagtctggggagctcctgacccgcaggctaaggaaggtgggcttccag
gccatgttgaaacaggaggtaggctggtttgatgaccccaggaacagccctggagctctc
accaccaggctggccaccgacgcctccatggtccagggggcaactggatcgcagattggg
atgattgtgaactccttgaccaacatcggagcgtctttcatcattgcgttctcctttagc
tggaagttaagcttggtagtggtttgctttttaccacttattggcttgtctggggtcttc
caagccaaaatgctgacaggtttcgcaaacgaggataagaaggcaatggaagcagcagga
caggtgtccagcgaggctctagccaacatcaggaccatcgcagggctgtgcaaggagagc
acatttgtggagacctatgagcagcagctggaggctccgtataagtctgccaagaagaag
gcaaacatctacggcatctgttttgcctttgctcagtgtgttatctttatggcgtacgcc
gcctcctttagatatggaggctatctggtcagctctgaaagattacactacctggtggtc
ttcagagtgatctctgccattgtgatcagtgggacggcgctgggaaaagcttcctcattc
accccagattatgccaaagccaagattgcagctgcccagttctttaaactgttggaccga
gtccccaaaatcagcatgagtcagatagacggggagaaatgggatgatttcaaaggggag
ttagaattcatcaactgcaagttcacatacccaacccggcctgacatccaggtgctaaat
ggactactggtgtctgtgaaaccgggccagaccctggcctttgtgggctgtagcggctgc
gggaagagcactagtgtgcagctattggagaggttctatgatccagatgagggcagagtg
ttgatcgatggccgtccatcacacactgtcaacgtgcccttcctgagggctcagattggc
atcgtctcccaagagcccgtgctgtttgactgcagtattgctgaaaacatacagtatggc
gataacaccaggaggatgagcatggaggagattgttgatgctgcaaagaaagcttatctc
catgactttgtgatgactctgccagataaatatgagactccagttggcgcccagggctcc
cagctctccagagggcaaaaacaacgcatcgccatcgctcgggcaatagtcaggaaccct
aagatcctgcttctggatgaggccacctctgcgttggacacagagagtgaaaagacagtg
caggcggctttggatgaggccagacgtggacgcacctgcattgtcattgcccacagactg
tctaccatccagacggcagatatcatagccgtcatgtcccaaggtgctgtcatagaaagg
gggacacatgaggagctcatggctaagagggctgcctactacaaactagtcacaacaggg
gctccgatcagctaa
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