Oncorhynchus tshawytscha (Chinook salmon): 112225234
Help
Entry
112225234 CDS
T05605
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112225234
09142 Cell motility
04814 Motor proteins
112225234
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112225234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112225234
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112225234
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
112225234
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
112225234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
112225234
NCBI-ProteinID:
XP_024244748
LinkDB
All DBs
Position
LG26:14610333..14632487
Genome browser
AA seq
633 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADLKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTSKSVGTPSEAGSQDSGDGAVGSRTLHWDSDPSTLQLHS
DSELGRGPLKLGMAKITHVDFPPKETVSYTKETQTPVTTQQKEEEDEEEEEEEITPPQPV
LEIQMEKPDQKEEEEEEAPPQELTEEEKLQILHSSEFITFFDHSTRIVERALSQHVDVFF
DYSGREMEEKEGEIQAGAKLFLNRQFVDERWSKHRVVTCLDWSPQYPELLVASYNNNEEA
PHEPDGVALVWNMKYKKNTPEYVFHCQSAVMSAAFARFHPNLVVGGTYSGQIVLWDNRSN
KRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELV
FKQSKAVAVTSMSFPLGDVNNFAVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCH
TATGPVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDG
VGHLDLWNLNNDTEVPTASTTVEGNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAV
PRNDEWTRFVRTLAEINENRDDAEELAAQRLSA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctgaaagcggagcttgaacggaagaagcaacgcctggcccag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacctgaag
aaagatgccgccccactggatgactcggatttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacatcagctgatgtccctgttgtccctcctcccatgtcg
ccgacctccaaatctgtgggcacaccaagcgaggcagggagccaagactcgggcgacggc
gccgtgggatccaggactctacactgggactctgacccgtctactcttcagcttcactct
gactccgagctggggcgtggacctctgaagctgggcatggccaagatcacccatgttgac
ttccctccaaaagagacggtgtcgtacaccaaggagacccagacgcctgtgacgacccag
cagaaagaagaggaagacgaggaggaggaggaggaggagatcactccaccacaaccagtg
cttgagatccaaatggagaaaccagaccagaaagaggaggaggaggaggaagcacctcca
caagagctgactgaggaggagaagctgcagatcctccactcctcagagttcataaccttc
tttgaccacagcacccgcatcgtggagagggccctgtcccaacacgtggacgtcttcttc
gactacagtggccgggagatggaggagaaggaaggtgagatccaagctggggccaagctg
tttctgaacagacagtttgtggacgagcgctggtctaagcatcgcgtggtcacctgtctg
gactggtcccctcagtatcctgagctgctggttgcctcatacaacaacaacgaggaagcc
ccccacgagccggacggggtggccctggtctggaacatgaagtacaagaagaacacgccg
gaatacgtcttccactgccagtctgcagtgatgtcggccgcctttgccaggttccaccct
aacctggtggtggggggcacctactcggggcagatcgttctgtgggacaacaggagcaac
aagaggacccccgtgcagaggacccctctgtcagcagcagctcacacgcacccagtgtac
tgtgtgaacgtggtgggcacccagaatgcccacaacctcattagcatctctaccgatggc
aagatgtgttcctggagcctggacatgctgtctcaaccgcaggacagcctggagctggtg
ttcaagcagtcgaaggccgtcgctgtcacctccatgtctttccccctcggagatgtcaac
aactttgcggtggggagcgaggacgggtccgtctacatggcgtgtcgccatggaagtaaa
gcagggatcagtgagatgtttgagggccaccacgggcctatcacagggatagactgtcac
acagcgaccgggcccgtcgacttctcccacctgtttgtcacctcctcctttgactggacc
gtcaagctgtggagcaccaagaacaacaagccactgtactcgttcgaggacaactcggat
tacgtctatgacgtcatgtggtcccccactcacccggctctgtttgcgtgtgtggatgga
gtgggccatcttgatctgtggaacctcaacaacgacactgaggttcctacagccagtacc
acagtggaggggaacccagccctgaaccgtgtgcgctgggcccactctggcaaagagata
gccgtgggagactctgatggacagatcctggtctatgatgttggagagcaaatcgctgtt
ccacgcaacgacgagtggacccgttttgtccgaaccctggcggagatcaacgagaaccgg
gatgacgccgaggagcttgccgctcagcgcctctctgcttga
DBGET
integrated database retrieval system
