Oncorhynchus tshawytscha (Chinook salmon): 112225343
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Entry
112225343 CDS
T05605
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112225343 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112225343 (pou2f1b)
03021 Transcription machinery [BR:
otw03021
]
112225343 (pou2f1b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112225343 (pou2f1b)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
112225343 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
DUF3839
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112225343
NCBI-ProteinID:
XP_024244991
LinkDB
All DBs
Position
LG26:20857952..20879597
Genome browser
AA seq
763 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESQSGDGNTGVQTNGLDFQRQTVQATNAIT
NAHAQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQMFLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPVQITSIPSVSTHLPGQLSQLGY
PYEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQTPQGQQSMYTT
QSFLQAHNLLTQLPQSQANLLQTQPSINLASQPATPSHTIAATPIQPLSHSQTPPKRLDT
PSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSF
KNMCKLKPLLEKWLNDAVCAENLSSDLALSSPCGLGSPGLGMEGLNRRRKKRTSIETNIR
VALEKSFLEQNQKPTSEEITIIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGHSITGTG
STPIKTIFTPNSPLVASTASLVTSNTPTTLTLNPVMPLTSTSVSGLTLTGTTIGATTNTA
SVISTAPMVTAVTSSTSLSPSPTALQATAAETDGTQEHTVVMQAPSSLATNLGTGQVMVA
GPGLSAALQGAAQLPTSSSYASMAGLNPGLMASSQFTPGGALLSLAPGGLGGAINPAMLS
NSTLATIQGLWSALASGGTLPITSLDGSGNLLFANTSAGSTPNLVQPLFLNPQNLSLLTS
NPVSLVSAGAAGGGALQVTANHQVTTATVPVPVSTITTASKAQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcagaaactagtaaatgtgcaatggagagtcagagtggggacggaaacacagga
gtccaaacgaatggactggactttcagaggcagacggtgcaggccacaaacgcaatcacc
aatgcacatgcacaggctctgctccaacagtccaagtctgaagactcgggtgcaattccg
acctccgtccagcagggggtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagatgtttttgcagcaggcccaggcccag
ctcttggcagcagccatgcagcagcaatcagccagccagcagagcagcaccacgggggcc
agcatctctgcctccgcagccacccccatcacacagctgcccctgtcccagcccgtccag
atcacctctattccctctgtctctactcatctcccaggccagctaagccagctgggatac
ccgtatgagatggcgaccttcagcagttacctacctcagttacagcagctgcagcagcag
aacctaaccatgccccagtttgtcctggttcaacctggccaccacatcgccacccagctg
cagcctggtcagttcatcatctcacagacgccgcagggccagcagagtatgtacacaacg
cagagtttcctgcaagcccataatcttctaactcaactacctcaaagccaagccaacctc
ctgcagactcagccaagcatcaaccttgcctcacagccagcgactccgtcccacacgata
gcagccacgcccatccagcccctgtcccacagtcagaccccgcccaaacgcctggacaca
cccagtctggaggagcccagcgacctggaggagctggaacagttcgctaagaccttcaaa
cagagacgcatcaaactgggcttcacacagggggatgttggcctggccatgggcaagctg
tatggtaacgacttcagccagaccaccatttcccgcttcgaggccttgaacctcagcttt
aagaacatgtgcaagctgaagccacttctggagaagtggctcaacgatgcagtttgtgca
gagaatctgtcgtctgacctggccctgtccagcccttgcggcctggggtcccccggtctg
ggcatggaggggctcaaccgccgacgcaagaagaggaccagcatcgagaccaacatccgc
gtggccttagaaaagagctttctggagcagaaccaaaaacctacctctgaggagatcacc
ataattgctgaccagctcaacatggagaaggaggtgatccgggtgtggttctgtaaccgt
cggcaaaaagagaagcggatcaacccccccagcagcggacacagcatcacagggacaggc
agcacccccatcaaaaccatcttcacccccaatagccccttggtggccagtacggcaagc
cttgtgaccagtaacacaccaaccacactcactttaaacccagtgatgcctctcaccagc
accagcgtctccggcctgaccttaacaggcacgacgatcggagcgaccacaaacacggca
tctgtcatctctacggcacccatggttaccgcggtgaccagctccacctcgctaagcccc
tcccccacggccctccaggccacggcagcggagacggatggaacccaggagcacacggtg
gtcatgcaggcgccatcgtcactagcaaccaatctggggacaggtcaggtgatggtggct
ggaccggggctgtcagcggccctgcaaggagctgcccagttacccaccagttctagttac
gcctccatggctggccttaacccaggactgatggcatcctcacagttcactcctgggggg
gccttgctgagcttagctccgggtgggcttggaggggctataaaccctgccatgttgagc
aacagcaccctggccaccatccaaggtctatggagcgctctggcatcgggtggcactctc
cccatcacctcgctggacgggagtggtaacctgctgttcgctaacacctcggccggcagc
acccccaacctggtgcagcccctcttcctgaacccccagaacctgtccctgctcaccagc
aaccccgtcagcctggtgtcggccggagccgccgggggaggggccctgcaggtcacagcc
aaccaccaggtcaccacggcgaccgtcccagtgcccgtctccaccatcaccactgcctcc
aaggcccagtga
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