Oncorhynchus tshawytscha (Chinook salmon): 112225371
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Entry
112225371 CDS
T05605
Symbol
arhgef7a
Name
(RefSeq) rho guanine nucleotide exchange factor 7a isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112225371 (arhgef7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225371 (arhgef7a)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112225371 (arhgef7a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_1
SH3_2
SH3_9
CH
PH
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
112225371
NCBI-ProteinID:
XP_042162362
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Position
LG26:21800950..21839585
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AA seq
801 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEAFLQTSLKDGVVLCRLLERLSPGSMDKIYQEP
KNDGECLSNIKEFLKGCTSFRVELFEPSDLLLGLNFSKILSSLVALNKVTADIGVGSDSV
CARHSSAYRIKSFESLASQSSLGRSSKLLQNQFRSLDMSEGSGTQLLVKARFNFEQTNED
ELSFNKGDVINVTRQEEGGWWEGNFNSKTGWFPSNYVREIKGCDKQVSPKSGTLKSPPKG
VDTTAISKTYYNLVLQNILETETEYSKDLQSLLTNYLRSLQSTEKLSSTDVYLILGNLED
INTFQQMLVQSLEECTKLPESQQRVGGFFMNLMPQMKALYVGYCSNHPSAVNVLTQHSEE
LGEFMEGKGASSPGILTLTTGLSKPFMRLDKYPTLTKELERHMEESHPDWPDIQKCMTTF
KSLSAQCQEVRKRKELELQIVTESIRLWEGDDIRTLGSVLYMSQALVNSPGAEEKCERYL
MLFPHVLLMLSASPRMSGFIFQGKLPLTGMTVTMLEDSEAHKNSFELSGSLFERLQVVCN
NQQDQQDWVDHLTRQTKHTTVPSHKPLTVPCHTLPSHPLTPSRHAEGRAMTVAPAYHTLP
HPSSHGAPHSTMMWGPLEPPNTPKPWSLSCLRPSPPLRPSAALSYKEDLSKSPKSVKKLL
PKRKPERKQSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSRAMRRDTGLQVI
IPGEEKIIVEETTSNGQTVVGEKSLEDVVYALRDEVQELKQDNKKMKRSLEEEQRARKDL
EKVVRRVLKTMNDPTWDETNL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgcggagcagacggtcacttggctgatcacactcggcgtgctggagtcgccg
aaaaagactatatcggatccagaggcatttttacagacctccctcaaagatggggtggtc
ttgtgcagactgctggagcggctgagcccgggctccatggacaaaatctaccaagaaccg
aagaacgacggcgagtgcttgagcaacataaaggagtttctcaaaggctgcacttcgttt
cgcgtagagctgtttgagcccagtgatctgctcctaggactgaacttctccaagatactc
agcagtctggtggctctcaacaaagtgactgcagacattggagtgggcagtgacagtgtc
tgtgcccgtcactcgtcagcctatcggatcaagtcgtttgagtctctggcctcccagtca
tcactgggtcgatcctccaagctgcttcagaaccagttccgcagcctggacatgtctgag
ggcagcgggacgcagctattggtcaaggctcgcttcaactttgaacaaaccaatgaggac
gagctgtccttcaacaagggggatgtcatcaatgtgacacgccaggaggagggcggctgg
tgggaggggaacttcaacagcaagaccggctggttccctagcaactatgtccgtgagatc
aaaggctgtgacaaacaagtgtcccccaaatctgggaccctcaagagccccccaaaaggc
gttgacactacggccattagcaagacctactacaacctggtgctgcagaacattctagaa
acagagacagaatattccaaggacctccagagccttctgaccaactacctgcgatcactc
cagagcacagagaaactgagcagtacagatgtgtacctgatcctggggaacctggaggat
atcaacaccttccagcagatgctcgtccaatcactggaggagtgcaccaaacttccagag
agccagcagagggtagggggcttcttcatgaacctgatgccccagatgaaggctctctac
gtgggttactgctccaaccacccctcggcagtcaatgtgctcacccagcacagtgaggag
ctgggggagtttatggaggggaagggagccagtagtccaggtatcctgaccctgaccaca
ggtctcagtaaacccttcatgaggctggacaaataccctacactaacgaaggaactggag
agacacatggaggagagtcaccccgactggccagacatccagaagtgtatgacaacattc
aagagcctctcggcccagtgccaggaggtgaggaagaggaaggagctggagctgcagata
gtgactgagtccatcaggctgtgggaaggagacgacatcaggacactgggctctgttctc
tacatgagtcaggctctggttaacagccctggagcagaggagaagtgtgagcgctacctc
atgcttttccctcatgtcctcctcatgctgtctgccagtccaaggatgagtggcttcata
ttccaggggaagctaccattgactggtatgactgtgaccatgctagaggacagtgaggcc
cacaaaaactcctttgagctttctggcagtctatttgagcgtctccaggttgtgtgtaac
aatcagcaagatcagcaggactgggtagaccacctgacccgtcagaccaaacacaccact
gttcccagccacaaacccctcactgtcccctgccacacgttgccctcccatcctctgact
ccgtcccgtcacgcggagggccgggcgatgacggtggctcctgcctaccacaccctgccg
cacccctcctcccacggggctccacacagcaccatgatgtgggggcccctggagcccccc
aacacccccaagccctggagcctcagctgcctgcgtccctcaccccctctcaggccctct
gcagctctctcctacaaggaggacctcagtaaaagccctaagagtgtgaagaagcttctt
cctaaacgtaaaccagagcgaaaacagtcagatgaggagtttgccctgaggaagagtaca
gctgctctagaggaagatgctcagatcctaaaggtgatagaagcttattgtaccagcgcc
aagaccagacagaccctcaactccagggcgatgcggagggacacagggctgcaagtcatc
atccctggagaggagaagatcattgtggaggagaccacgagcaacggacagactgtagtc
ggagagaagagccttgaggatgtagtgtacgccttgagggacgaggtacaggagctcaaa
caggacaataagaagatgaagaggtcactggaggaggagcagagggcacggaaagatctg
gagaaagtggtcaggagggtcttaaagactatgaacgaccccacctgggacgagactaac
ttatga
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