Oncorhynchus tshawytscha (Chinook salmon): 112225373
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Entry
112225373 CDS
T05605
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225373
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112225373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CRAL_TRIO_2
PH
SH3_1
SH3_2
hSH3
CRAL_TRIO
Frataxin_Cyay
Spectrin
Motif
Other DBs
NCBI-GeneID:
112225373
NCBI-ProteinID:
XP_024245055
LinkDB
All DBs
Position
LG26:22109359..22163159
Genome browser
AA seq
1382 aa
AA seq
DB search
MELDLKERRQGFLEEGKGRGGTTGEEGREVSELGGELEEECEVELDSGLCVEGESERSVG
QMGLDSGERIEGQKEQEDHWLNIEGQLECLPGRQGELELGLDSRLTGESMEESHMKELSD
VHSWEKMKRGTEIDKRIEVEGERVESHIWMGGETEDKSMEEELKLRLRPVKEKRGMSVRI
SLEEVERYYRFSRCCYWLQNEIMQQESSPLCAIDITPDLRKQFAYLSGGRGQNGSPIIVF
PEFPAFGEIQEREFHNVLTYLTSIPSLSAAGVGFILVIDRRQDRWAAVKGTLLRIAGSFP
GNLQLVLVLRPTTLFQRTLSDILFKFNKDEFKMKVPMIMLSSVTELHSYIDRTQLTTELG
GTQEYCHEKWISHRTAIEGFALMVKRTAQILQSFGTELAETELPNDIQATSNLLGTHINK
KSKMKEDLLVALGQGSRLLESINEPVVRDPDHNMNQDELENLATVQRLLSQLNETERAFD
EFWERHKTKLEQCLLLRHFEHNYREVRCLLDQVAQRLTAFSEVGISPAHADHIFRELSSH
EERVCEVLDRAQALAREGDELIQNTHYAEDSIQPKCIELRAVNEELSTYLRAKKDHLLRA
IELHHSLERAAKWCDDGIYLLASQPVDKCQSHDGAESALQEIERYLDTAGQNKLTDPSAI
CRDYETVLNLEFRDQVDKVFQKQVSMQEMFEKRRVSLKKLAAKHTRPVQPVAPRPEAIKS
PLSSPAKRVLEKSCSEGDSVNRVSCRKVEGQLQSNRSASMSEEDENLAILRKHVMNELLE
TERAYVEELLCVLQGYASEMDNPAMASLMPIPLQNKKDVLFGNMPEIYHFHKRTFLRELE
EYEDCPELVGRCFLERMTDLQIYEKYCQNKPRSESLWRQCSDCSFFQECQKKLEHKLGLD
SYLLKPVQRITKYQLLLKELLKYSKGCEGSEDLQEALTSILGILKAVNDSMHLIAITGYD
GNMGDLGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEG
YEKAPSYSFKQSLNMSAVGITENAKGDNKKFEVWCNSREEVYIVQAPTSEVKTTWVKEIR
KVLTTQLEAYREASQQRPSDGLFQFPSCAGAPVSLSPFRRGERSMKEKKGEPSSPDANSC
SFPKTKEEAATSPTSDRAAVAKKRFTLQGFSNFNKDLSPPDNKSLTLPRIPFSPSGSPTS
PDHKTKRHEIKSDPTPFGFKDPGPHAHLHLGRVRWFSTSSLLQAKRRGWTKGSLSLDANE
ENDGYSSPEEPLNSDPEDEEGKKLCAGKYTVVSDYEKGEGQDLSVKSGETVQLIKEGDDG
QWFVKNLKTKQEGWVAAANILTLIGESKSCQSLTSSEGSGSGNLSTSSSCCETYTSFSDI
KP
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggaactggacctaaaggagcggagacagggattcttggaagaggggaaggggaggggg
ggaactacaggagaggaggggagagaggtgtcggaactaggaggagagttggaggaagag
tgtgaggtagagttggactcaggactgtgtgtagagggggagtcagagcggagtgtagga
cagatggggctagactcaggggaacgaatagagggacagaaggagcaggaggatcattgg
cttaacattgagggacagctagagtgtttacctggacgtcagggagagttagagttaggt
ttggactcaaggttgacaggggagagcatggaggaatcacacatgaaggaactatcagat
gtacattcatgggaaaagatgaagagagggacagagatagataaaaggatagaggtagag
ggggagagggtggaatctcacatatggatggggggagagactgaggacaaaagtatggag
gaagagttgaagttgcgtttaaggccggtgaaggagaaaagagggatgtctgttcgtatt
tccctggaggaggtggagagatactaccgtttctcccgttgctgctactggctacaaaat
gagatcatgcagcaggagagcagtcccctctgtgccatcgacatcacccctgacctcagg
aagcagtttgcctacctctcagggggccgagggcagaacggcagccccatcattgtgttc
ccagagtttcctgcattcggagaaatccaggagagggagttccacaacgtgctcacatac
ctgaccagcatccccagtctgtctgcggcaggagtgggttttatcctggtcattgaccgg
cggcaggaccgatgggcggccgtcaaggggaccctgctccgcattgcaggttcgttccca
gggaacctgcagttagttctggtattgaggcccaccaccttattccagaggacactctca
gacatcttgttcaagttcaacaaggatgaattcaagatgaaggtgccgatgattatgctg
agttctgtgactgagctccactcctacatagaccggacacaactgactactgagctggga
ggaacccaggagtactgccacgagaagtggatctcacaccgcaccgccattgagggcttt
gctctgatggtaaagagaacagctcagatcctgcagtcgtttgggacagagctagcagag
accgaactacccaatgacatccaggctaccagcaacctactggggacacacatcaacaag
aagagcaagatgaaggaggatctgctggtggctttaggacagggcagcagactgttggag
agtattaatgagccagtggtcagagacccagaccacaacatgaaccaggacgaactggag
aacctggccaccgtacagagactgctttcccagttgaatgagacagaacgggcttttgat
gagttctgggagagacataagaccaagctggagcaatgtctgctactccgtcactttgaa
cacaactacagagaggtgaggtgtctgctggaccaggtggcacagagattgacagctttc
tcggaggtggggataagccccgcccacgctgatcacatcttccgcgagctgagcagccac
gaggagagagtctgtgaggtactggaccgagcccaggctctggcccgtgagggtgacgag
ttgattcagaacacccactatgctgaggactccatccagcccaaatgcattgagctccga
gccgtgaacgaggaactgagcacttacctgagagcaaagaaagaccacttactcagagct
atagagctgcaccacagcctggagagggctgctaagtggtgtgatgatggcatctacctg
ctggcctctcagcccgtggacaagtgtcagtcacatgacggggcggagtcagcgctgcag
gagattgagcgttacctggatacagcaggacagaacaaactgactgatcctagtgccatc
tgcagggactacgaaacagtgctcaacctggagttcagagaccaagtggacaaggtgttc
cagaagcaggtctccatgcaggagatgtttgagaagaggagggtcagtctgaagaagctg
gcagccaaacacaccaggccagtccagcctgtggccccaaggcctgaagccatcaagtcc
ccactgtcctcgccagcaaagagagtgctggagaagagctgctcagagggagactctgtg
aacagggtcagctgtagaaaagtggagggccagctacagagcaacagaagtgcctctatg
tcagaggaggacgagaacctggccatcctcagaaaacatgtaatgaatgagctgctggag
acagagagggcatacgtggaggaactgctctgtgttctacagggctatgcctcagagatg
gacaacccagccatggccagtctcatgcccattcctctgcaaaacaagaaagatgtgctg
tttggcaacatgccagagatctaccacttccacaaaaggacctttctgagggagttggaa
gagtacgaagactgcccggaacttgtgggtcggtgttttctggagaggatgacagacctg
cagatctatgagaagtattgtcagaataaacctcgctctgagagcttgtggagacagtgc
tccgactgctccttcttccaggagtgtcagaagaagctggaacataaactgggcttggac
tcctatctcctgaaaccggtccagagaatcaccaaataccagctcctgttgaaggagctg
ctgaagtacagtaagggctgtgaggggtcagaagacctgcaggaggcgctcacctccatc
ctgggcatcctgaaggctgtcaacgactccatgcacctcatcgctatcactggatacgat
ggtaacatgggcgacctgggacggctgctgatgcaggggtcattcagtgtgtggacagaa
cacaagaaaggtcatgccaaggtcaaggacctggcccgctttaagcccatgcagagacac
ctgttcctgcatgagaaggccctgctcttctgtaagagacgggaggagaacggggagggc
tacgagaaagccccctcctacagcttcaaacagtccctcaatatgagtgctgtgggcatc
actgagaacgccaaaggtgacaacaagaagtttgaggtctggtgcaactcacgggaggag
gtgtatatcgttcaggccccaacgtctgaggtaaaaacaacgtgggtgaaggagatccgg
aaggttctgacaacgcagctggaagcctacagagaagccagtcaacagaggccgtcagac
ggactgttccagttcccctcttgtgctggagcacctgtcagcctcagtccgtttagaaga
ggggagaggagcatgaaggagaagaagggagaacccagcagccctgacgctaactcctgc
tccttcccaaagaccaaagaagaagcagcgaccagtcctacctcagacagagcagctgtg
gctaaaaagcgttttaccttgcagggcttcagcaacttcaacaaagacctctcgcctcct
gacaataaaagcttaactttacccaggattcccttctctccatcaggatctcccacaagc
cctgaccataaaaccaaacgtcatgagataaagagtgatcctactccgttcggctttaaa
gacccaggccctcacgctcacctccacctgggcagagtcaggtggttcagcacctcgagt
ctcttacaggccaagaggagaggatggaccaagggctctctctcattggacgccaatgag
gagaatgatggatactctagccctgaagagcccctgaactcagaccccgaggacgaggag
ggaaagaaactatgtgcagggaagtacacagtggtgtctgactatgagaagggagaaggc
caggacctgtcagtcaagagtggtgaaacggtgcagctgatcaaggagggagatgatgga
cagtggtttgtgaagaacttgaagaccaagcaggagggctgggtggctgcagccaacatt
ctcaccctgattggagagtccaagtcctgccagtctctcaccagctcagagggcagtggc
tcagggaacctcagcacttcatccagctgctgtgagacttacaccagcttctctgacatc
aagccctga
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