KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112225403
Entry
112225403         CDS       T05605                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112225403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112225403
Spliceosome [BR:otw03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112225403
 Complex B
    112225403
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 112225403
NCBI-ProteinID: XP_024245117
UniProt: A0AAZ3SWZ4
LinkDB
Position
LG26:complement(24335793..24348577)
AA seq 237 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRGGGHHSRSRSRERRSRSRDRGRGGGGGGRDREKRRSRDRERSGRF
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcggaatacctggcgtccattttcggtacagagaaagataaggtgaactgttctttc
tactttaaaattggtgcctgccgccatggtgaccgatgctccagattacataataaacca
actttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtttgcgctgtgccgtcagtgatgtggagatgcaggagcactatgacgag
ttctttgaggaggtcttcacagagatggaggagaagtatggagaggtggaggagatgaac
gtgtgcgataacctgggagaccatctggtcggaaacgtatatgtgaagttccgtcgtgaa
gaagacgcggagaaggcagtgatggatctgaataaccgctggttcaacggtcagcccatc
cacgccgagctctctcccgttaccgacttcagagaagcctgctgccgccagtacgagatg
ggggagtgcactcgaggaggcttctgtaacttcatgcacctgaagcccatctctagggag
ctgaggagggagctatacggacgccgcaggaagaggggaggggggcatcattctcgctcc
cgttccagggaacgtcgttcgcgctcaagggacagaggaaggggaggtggtggaggtgga
cgcgaccgcgagaaaaggcgctccagagaccgagaacgctctggaagattctaa

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