Oncorhynchus tshawytscha (Chinook salmon): 112225404
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Entry
112225404 CDS
T05605
Name
(RefSeq) GA-binding protein alpha chain-like
KO
K09441
GA-binding protein transcription factor, alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112225404
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
112225404
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112225404
NCBI-ProteinID:
XP_042162276
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All DBs
Position
LG26:24351199..24359980
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AA seq
439 aa
AA seq
DB search
MSKSETEEMIEIEIDGQEKQECLEEGVEEQTITSADLIQQDIDINEPIGNLKKLLEPRIQ
MPLDGYEICLQDIQLHPDHSLFDQGVKTDGTVQLSLQIITKPGEEKLNILEIVKPVETVE
VVIDPDAAGEEGTLMEEEGQLISVERSSLSDDTSEQVTRWAAALEGYRKEQVRLGIPYDP
VQWTADQVIHWAVWVMKEFSIDEMEVGGIHILGCDLCTFTQDEFLQRVPSGEILWSHLEL
LRKYVLASQDQSGQEATVTIDQQVQIIPAAVPTSHTTIKVLKQSRGPKTPRISGGEERSS
PGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGHRKNKPTM
NYEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNNLVTECEQKKLARI
QLHGIGQPITTVYASAQDS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagcgagaccgaggagatgatagagatcgagatcgatggacaggagaaacag
gagtgtctggaggagggggttgaggagcagaccatcacatcagccgatctgatccaacag
gacatcgacatcaatgagccaatcggtaacctgaagaagctcctggagccccgtatccag
atgccattggacggatatgagatctgtctacaggacatccagctacatccagaccacagc
ctctttgatcagggagtgaagaccgatggcacagtgcaactcagcctacagatcatcacc
aagccaggcgaggagaagctgaacatcctggagattgtgaagccggtggagacggtggag
gtggtgatcgacccagatgcagcgggggaagagggcaccctgatggaggaggagggccag
ctgatctcagtggagcgctcttccctgtcagacgacacatcggagcaggtgacccgctgg
gccgccgcactggagggctaccgcaaggagcaggtccgcctggggataccctacgaccca
gtacaatggacggcagaccaggtgatccactgggcagtgtgggtgatgaaggagttcagc
attgacgagatggaggtgggtgggattcacatcctgggttgcgacctctgcactttcacc
caggacgagttcctgcagagggtccccagtggagagatcctctggagccacctggagctg
cttcgcaagtatgtgttggccagtcaggaccagtctggccaggaggccacagtcaccatc
gaccaacaggtccagatcatcccggctgctgtgccgacctcgcacaccaccattaaggtg
ctgaagcagagccgcggccccaaaacaccccgcatctccggaggagaggaacgcagctca
cctggcaaccgcacaggtaacaatggtcagatccaactgtggcagttcctgttggagctg
ttgactgataaggatgctagagactgtatatcctgggtgggagaggagggagagttcaaa
ctcaaccagcctgaactggttgcccagaaatggggccaccgcaagaacaagccgaccatg
aactacgagaaactcagccgagcactcaggtattactatgatggggacatgatcagcaag
gtgcagggcaagcgctttgtctacaagtttgtgtgtgacctgaggactctgattggctac
agcgctgctgagctcaacaacctggtgactgagtgtgagcagaagaagctggcccgcatt
cagttgcacggaattggccagcccatcaccactgtgtacgcctccgcacaggacagctga
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