Oncorhynchus tshawytscha (Chinook salmon): 112225418
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Entry
112225418 CDS
T05605
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112225418 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112225418 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112225418 (tnfsf13b)
04090 CD molecules [BR:
otw04090
]
112225418 (tnfsf13b)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Tumor necrosis fators
112225418 (tnfsf13b)
CD molecules [BR:
otw04090
]
Proteins
112225418 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
112225418
NCBI-ProteinID:
XP_024245147
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All DBs
Position
LG26:complement(25302075..25308878)
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AA seq
266 aa
AA seq
DB search
MASAGPNPEGGRPASRQESGGRRLSWLVLLLTLAAFTSSSLSALSLYHLLALRAEVEELR
SEVFRRREEQQEARHGETLQQMSSRARRSSPDHPHPPDPQPGLSFVRKRSVGTGTENSVS
QPCLQMLADSNRKTFQKEFALEPYTGIPWQAGLRRGSALEAESDSILVREEGYYFVYSQV
YYMDTTFAMGHVVIRKKRNVVGDEAQHVTLFRCIQNMNPIYPYNTCYTGGIVKLEVGDSV
ELLIPRSTAKVSLDGDSTFLGAVRLA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcaggtccaaatcccgagggtggtagacctgcttccaggcaggagtctggg
ggtcggaggctgtcctggctggttctgctgctgactctggcagcgttcacctcctcgtct
ctctctgctctgtctctgtaccacctgctggcccttagggccgaagttgaggagctccgg
tcagaggtcttccgtaggagagaggagcaacaagaggctaggcatggagagacactgcag
cagatgagcagcagagccagaagaagcagcccagaccatccacacccccctgacccccag
cctgggctgtctttcgtcaggaagaggagtgtgggcacaggaactgagaactctgtgtct
cagccttgtctacagatgctagcagatagcaacaggaaaacattccagaaagagtttgcg
ctggagccttacacagggatcccctggcaggcggggcttagaagaggctccgccctggag
gcagagagcgacagcatcctggtcagagaggagggatactactttgtctacagtcaggtg
tactacatggatacgacctttgccatgggtcatgtggtgatcaggaagaagaggaacgtg
gtgggagatgaagctcagcatgtcacattgttccgctgtatccagaacatgaaccctatc
tacccatacaacacctgttacacagggggtatagtgaagctggaggtcggggacagtgtg
gagctgttgatccctcgctctacagccaaagtttctctggatggagactccactttcctg
ggcgctgtcagactggcctga
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