Oncorhynchus tshawytscha (Chinook salmon): 112225428
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Entry
112225428 CDS
T05605
Name
(RefSeq) probable G-protein coupled receptor 156
KO
K04617
gamma-aminobutyric acid type B receptor-like
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112225428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112225428
G protein-coupled receptors [BR:
otw04030
]
Metabotropic glutamate receptor family
GABA
112225428
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
Spc29
RapA_C
Motif
Other DBs
NCBI-GeneID:
112225428
NCBI-ProteinID:
XP_024245164
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Position
LG26:complement(25911917..25938934)
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AA seq
842 aa
AA seq
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METELNCSSHCDYGLCLIHPGVNTQEDLEILQRLCTLSTMGVELQRQSLSPVLCAVVWTI
LSCGILLAFCFLLFTLRFKNNRIVKMSSPNLNVLTLCGSVLTYSSGFLFAFEERTHLQGG
GVRAILQARIWMFCIGSTLVFGPILGKTWRLYRVFTQRVPDKRVIIRDIQLMGLVALLIL
LDLLVLTAWSLTDPVKCARSIGAMVKVVERELSYSLSQLDSCSSLYSDLWVILLAMMKGG
LLLYGTYLAGLTSNVSLPPVNQSPTIMTAVSLVTLSTVVAVPVSQFLQAWPNVVYSVVAG
AIFICTLATNCMLFVPQLTQWRRFEEEQNSLSQMAKYFSSPSKSVHSVYSQDEVYYLLGE
NNSMKRLLNEKNAVIDSLQEQVNNAKDKLLRLMSNTHSHEDQEMDSSTTNLHSSSTQTTV
VPSDCFPTPLPQRDVAEPTLSSPPFSLPPLSSPPPPALSFPPGDCVSVKPCSVEFGPYIQ
GSEMETEAGGCKVEGTVSQQQCGAERSHLPVSPQPSVSSKTGVRTPAEMGGTQTTPSCQS
NYVTSSSTLPLVGLAPAQSEPSGCHGDTTSPWMAGVRQAGFVSSVQLQEILQELSVDTVM
ETALRSPNHSRGFRRPSQPSSTNPSVLSPLSFCTPHSPNHPLLFHYPSISPYVMRKRRPP
FHSPRGGPPPCYYPGSKPPGWGRRRDTGLSQPDKHPSKTQPLLNPVATETNLLRPDDSDG
EEGVEAWHRIRNSCGRRSSRWEHRPPPLRKCPPDGDGGGEGGPDRDHGRDSYGYWDSDSS
SLADYSYYHRPYCDACLQHGSYPSSDSSSSDSSDSEYGGFTSLCRSTHPVVNFKEDLKPT
FV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggagacagagttgaactgcagctctcactgtgactacggactctgcctcatccaccct
ggagtcaatacacaggaggacctggagatactgcagagactatgtaccctcagcacgatg
ggagtggagctgcagaggcagtctctctccccggtgctctgtgcagtggtctggactatt
ctctcctgtggcatcctgctggcattctgcttcctgctctttaccctgcgcttcaagaac
aacaggatagtgaagatgtctagtcctaacctcaatgtgctgactctgtgtgggagtgtc
ctcacctacagcagtggattcctattcgcttttgaggaacgcacccacctacaaggggga
ggagtgagagctatactacaggccaggatctggatgttttgtatcggcagtactctggta
tttgggcccatactggggaaaacatggcggctgtacagagtattcacccaacgcgtgcct
gacaagagagtgatcatcagagacatccagttgatgggcttggtagctctgttgattctg
ctggacctgctggttctgaccgcctggagtctaaccgacccggtcaaatgtgctcggtcc
attggggctatggtcaaggtggtggagagagaattgtcctactctctgtctcagctggac
tcctgttcctctctctattcagacctgtgggttatcctcctcgctatgatgaagggtggc
ctgctcctatatgggacctacctggccggtctgaccagcaacgtcagcctccctccggtc
aaccagtcccccaccatcatgaccgcggtcagcctggtcaccctttccacggtggttgca
gtcccagtgtcgcagttcctgcaggcctggcctaacgtggtctatagcgtggtagctgga
gccatcttcatctgtaccctcgccaccaactgtatgctgtttgtacctcagttaacccag
tggcgtcggtttgaggaggagcaaaacagccttagccagatggcgaagtacttcagcagc
cccagtaagagtgtccactctgtctacagccaggatgaagtctattatctgctgggagag
aacaactctatgaagaggctcctcaatgagaagaatgctgtaattgacagtctgcaggag
caggtgaacaacgccaaagacaagctattgcgcctcatgtccaatacccactctcacgag
gatcaggaaatggactcttccaccaccaacctccactcctcctccacccagaccacagtg
gtgccgtccgactgctttccaactcccctgccacagagagacgtagcagaacctaccctc
tcttctcctcctttctctctacctcctctctcttctcctccccctcctgccctctctttt
cccccaggggattgtgtgagtgttaaaccgtgcagtgtagagtttggcccatacatccag
ggttcagagatggagacagaggcagggggttgtaaggttgaggggactgtgtcccagcag
cagtgtggagcggaaaggtctcacctcccagtctcccctcagccctctgtttcttccaag
acaggagttagaacaccagcggagatgggagggacacaaaccacaccctcctgtcagtca
aactatgtcacttcctcatccactctccccctggtgggtttggcccctgctcagtcagaa
ccgtcaggttgccatggcgataccacatctccgtggatggcaggtgtcaggcaggcaggg
tttgtgagcagtgtgcagctgcaggagatactccaggaactgagcgtggacactgttatg
gaaacggccctccgctcaccaaatcacagcagggggttcaggagaccctctcagccctcc
tcgaccaatccctctgtcctctctcctctctccttctgcactcctcattcccccaatcac
cctctcctcttccactaccccagtatctccccctacgtaatgaggaaacgcagacctccg
ttccattcccccagaggggggcctccgccctgttactacccaggctccaagcctcctggt
tggggaaggaggagggacacggggctctcacaaccagacaagcacccctcaaaaacacaa
cctctgctcaatcctgtcgccacagagactaatcttctccgccccgacgacagtgatgga
gaagaaggcgtagaggcgtggcataggataagaaacagctgcgggaggcgcagctcaagg
tgggagcaccggccaccaccccttcgaaaatgccctccagatggtgatgggggaggtgag
ggagggccagacagagaccatggcagggactcgtatggttactgggactcagactccagc
agcttggctgactactcctactaccatcgtccctactgcgacgcctgcctgcaacacggc
tcatacccctccagcgacagctcctcctcagactcctcggacagtgagtatggcggcttc
accagcctctgccgctccacacatccggtggtcaacttcaaggaggacctcaaaccgacc
ttcgtatga
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