Oncorhynchus tshawytscha (Chinook salmon): 112225522
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Entry
112225522 CDS
T05605
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112225522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225522
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112225522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
112225522
NCBI-ProteinID:
XP_024245319
LinkDB
All DBs
Position
LG26:29721221..29749609
Genome browser
AA seq
1641 aa
AA seq
DB search
MEQDTVPESVASPPSGAAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCADLEKEVDTLKS
QPTGNSDESVIQELTERMSALLLEKAETQQSAVLLRKENEKVKQWEQDAVRKLATLQGEL
NQAKEDHQEKMATFEKTMHISQAKHKEEVEFFQRLLREKDESDREKESEREKEKHREREK
EDTNDSVEAVSHSLELQILSLQTELAAAVERSAQEAAVLQDDHQRAQTEAQQEVENLREE
LAQHSMQHEEELRALEEDFEMERERLLLLQEELSEQLALKDSFLQDVQEEEEEPSGRSSG
IARMLELSGLSQIDASDGETETGQLRSALEDLQSQNTMLQDELTFLGNVKTQLEAELERM
REEFQTEKEELEFKIDELLMTREGATPDLNMTPYRDPLSPATPKCDLQEVPALTQLQQSG
PQREPAYSLPASSASPSSPFPDTDHQSLTLEEQQRLILEVQELRTQCETLARKNTQAVGE
CESLAKERCQAVDECEYLARERGQAVAECEHTRDILRGLETELGQRTGDFVRQYEAMKEQ
GASAIQELQERVRGLTEEKESLVEKLRVLNENRESLLEEVQGLEKRLESFLEQTQAAEGL
NEQLQTSLEEKTELALEFKTSLEEKTVLASELKASLEEQTALTLELKASVDDLSRQNGEI
LSQLQMKESAVQELEDSLNVVSTERDQTLSALQEMEVVRLREVEGRQGQRERVAELQARI
EELEKEKSLLKNSLGEVQGSPGEEVEELQTRIEELEKERSLLKSSLGEVRGSPGEEVEEL
QACVEELEKERNLLKCNLGELVGDTEALQRDLVEMKLANEKMRTENQELLAQVSNATETL
ADKEREQKVGGETEREEEEKQEERRALQQQLTEKDKVISQLKSELAVLQSTASTVSEENT
AVEFTEKIALLEKESKEKNERMNKIKAVAVKARKELDTSRKEAVSLKEEVEVLKAEREKV
TSSMKDIIHGAEGYKNLQLDYDRQTEQLDKEREKVEGAEKQISELTKRLNTAVQQHEQLW
SEREDLMTGMETLRSTVRQMEGQTAELHRQTDTLNRDHQAERLLKEQKTKELSSLQKEVE
ELTAQLHRQKQQSQQTARELEQLRKEAQQSSLLDMEMADYERLVKELNTNLSEKDVCVEE
LKTQIHTHTQKEDTLNQEIEGLKSQLDQGEDKGAKMKQLLVKTKKDLADAKRQEASQMMT
LASLKGELETYQQELENSKIQCCDLSGERHRLHEQLRTLTEQQQRTSSTLQHRLTSLQQE
FNTAKAELSFVTTEFDSYKVRVHNVLKQQKNKSSAQSDGHATKQEREQIESMVDQYKAKL
QDSQQSLAVSTAEFQQLQMEHDTLLERHNKILQETVTKEAELRERLLSLQAESMSLRTEL
AQTVGQLTSQADAQRSGFREQIRHLQDEHRTTVETLQNQMTRLENQLFTLQSQTAPVQTS
RKPVVDRRTVDQGAMGGLGLSDLQSMAREEGEGMETTETEFLSLPHTPLPSLEHLLTSPD
PKQEPFVWQVEPTKEELSQKLATATRSMEHMNMLLHETEATNAVLMEQVNLLKSEVRRLE
RNHEREKSVANLEYLKNVLLQFIFLQSGSERRALLPVIHTMLQLSPEEKNKLAAIAMGEE
EVGGAKGSGWTSYLHSWSGIR
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacactgtcccggagtctgtggcctcaccaccttcaggtgcagcaaaatca
aagttggacacgttgtccaaggatgacctcatcaagtttgccaagaagcagatggctgcc
atccagaagatgaagtccaaatgtgcagatttggagaaggaagttgacaccctcaagtct
cagccaacaggcaattcagacgaatccgtcatacaggagctgactgagaggatgagtgcc
ttgctgctggagaaggctgagacccagcagagtgcagtgttactgcggaaggagaatgag
aaggtcaagcagtgggaacaggatgcagtaagaaaactggccaccctgcagggagagttg
aaccaggccaaggaagaccaccaggaaaagatggccacttttgagaagaccatgcacata
tcccaggccaaacataaagaagaagtcgaattctttcagaggcttctgagagagaaagac
gagagtgacagagagaaagagagcgaaagagagaaagaaaagcatagggaaagagaaaaa
gaagatacaaacgacagtgtagaagctgttagtcacagcctggagttgcagatcttgagt
ctgcagacagagctagctgcagcggtggagcgaagtgcccaggaggctgcagtgctgcag
gatgaccaccagagggcgcagacagaggcccagcaagaagtagagaacctacgagaagag
ttggcccagcatagcatgcaacatgaagaggagctgagagctctggaggaggactttgag
atggagagagagagactgcttctcctccaagaggagctcagtgagcagctcgctctcaaa
gacagtttcttgcaggatgtgcaggaggaagaggaggagcctagcggccgcagctcgggg
atagccaggatgttggagctgtctggtttaagtcagattgatgccagtgatggagagacg
gagactggacagctccgatccgccttggaggacctgcaatcccagaatacaatgctgcaa
gacgaactgaccttcttgggcaatgtgaagactcaactggaggcggagcttgagaggatg
agggaggagtttcagacagagaaggaagagctagaatttaagatcgatgagttgctgatg
acccgggagggtgcgacccctgacctgaatatgaccccttaccgagaccctctgagccca
gcaacccccaagtgtgaccttcaggaggttccagccctcactcagctccagcagagtggg
ccacagagagaaccagcgtacagcctgcctgccagctctgctagcccctccagccctttc
cctgacacagaccaccagagtttgaccctggaagaacagcagagactgatcctagaggtc
caggagctgaggacccagtgtgagaccttagctagaaagaatacccaggcggtgggtgaa
tgtgagtctctagccaaagagaggtgccaggcagtggatgaatgtgagtacctagccaga
gagagggggcaggcggtggctgagtgcgaacacaccagagacatcctgagaggcctggag
actgagctaggtcagaggactggggacttcgtcagacaatatgaagctatgaaggaacag
ggggcgtcagcgatccaggagctacaggagagagtcagagggctaactgaggagaaagag
agtctggtagagaagttgagagtgctgaatgaaaacagagaaagcctattggaggaggtc
cagggcctggagaagaggctggagagcttcctggagcagacacaggcagccgaggggctg
aacgagcagctgcagacttctctggaggagaagacagaattagctctcgagtttaagacc
tctctggaggagaagactgtgttagcctctgagctaaaggcctctcttgaggagcagaca
gcgttaaccctcgagctaaaggcttcagtggacgatctgagcaggcagaatggggagatc
ctctctcagctacagatgaaggagagtgctgttcaggagttggaggattcactcaatgtg
gtgagcacagagagggaccaaacactgtcagcactgcaggagatggaggtggtgaggctg
agggaggtggaggggaggcaaggccaaagagaaagggtggctgagctacaggctcgtata
gaggagctggagaaggagaagagcctgctgaagaacagcctaggggaggtgcaggggagc
ccaggggaggaggtggaggagctacagactcgtatagaggagctggagaaggagaggagc
ctgctgaagagcagcctaggggaggtgcgggggagcccaggggaggaggtggaggagctg
caggcttgtgtagaggagcttgaaaaggagaggaacctcctgaagtgtaatctgggggag
ctggtgggagatactgaagctctacagagagacctggtagagatgaaacttgccaatgag
aagatgagaacagagaatcaggaattattggcccaggtcagcaacgctacagagacactg
gcagacaaagagagggagcagaaggtgggaggagagacggagagagaggaggaggaaaaa
caagaggagaggagagcgctacaacagcagctaacagaaaaggacaaagtcatatcccag
ctgaagagtgagttggctgtcctgcagtctacagcctccactgtctcagaggagaacaca
gccgtagagttcactgagaaaatcgccctgctggagaaggaaagcaaagagaagaatgag
aggatgaataagatcaaggcggtggctgtgaaagccaggaaggagctggacaccagcagg
aaagaggctgtgtctctgaaggaggaagtggaagtgttgaaggctgagcgagagaaagtg
accagctcaatgaaagacatcattcatggagcagagggatacaagaacttacagttggac
tacgacagacagacagagcagctggataaggagagagagaaggtggagggagctgagaaa
cagatctccgagctgaccaaacgactcaacaccgccgtacaacagcatgagcagctgtgg
tcggagagagaggacctgatgactggaatggagacgctgaggagcacggtgagacagatg
gaaggacagacagcagagctgcacaggcagacagacaccctgaacagagaccatcaggct
gagagactactgaaggaacaaaagacaaaggagctgtcgtcgttgcagaaggaggtggag
gagttgaccgctcagctccacagacagaagcagcagtctcagcagactgcacgggagctg
gagcagctacgcaaggaggcccagcagagctcgttgttggacatggagatggcagactat
gaacgcctggtcaaagaactcaacaccaacctgtcagagaaggacgtgtgtgtggaggag
ctgaaaacacagatacacacacacactcagaaagaagacacactcaaccaggagattgag
ggtctgaagtcccagctggaccagggggaggacaagggcgccaagatgaaacagctgctg
gtgaaaaccaagaaagatctggcggacgccaagcggcaggaagcctctcagatgatgacc
ctggcctctctgaagggagaactggagacctaccaacaggagctagagaacagtaagatc
caatgctgtgacctgtctggggagcgccaccggctgcatgagcagctgaggactctgacg
gaacaacagcagagaacaagcagcaccctgcaacaccgactgacctcactacagcaggag
ttcaacactgccaaggctgagctgtcatttgtcactactgagtttgacagctataaggtc
agagttcacaatgtcctcaaacagcagaagaacaagagttcggcccagagtgacggacac
gccaccaaacaggagagagagcagattgagtccatggtggaccagtataaagccaagctg
caggacagtcagcagagtctggcggtgagcactgcagagttccaacagctccagatggaa
cacgacacactgctggaacgacacaacaagatactgcaggagaccgtaactaaagaggcc
gaactcagagagcgactcctgtctctccaggcagagagtatgtcgctgcggacagagctt
gcccagacggtgggtcaacttacctcccaggccgacgcccaacgctcagggttccgggag
cagatccgccaccttcaggacgaacacagaactacagtagagaccctgcagaaccagatg
acccggctggagaaccaactattcacattgcagagccagaccgctccagtccagaccagt
cgtaagccagtggtggaccgccggactgtggaccagggggcgatgggggggctgggcctc
agtgacctccagtccatggctagagaggagggggagggcatggagaccactgagacagag
ttcctgtccctcccacacacacccctaccctcactggagcatctactcacctccccagac
cccaaacaggagccgtttgtgtggcaggtggagccgactaaagaggagttaagtcagaag
ttggccacagctacacgcagtatggaacacatgaacatgctactgcatgagacagaggct
accaacgctgttctgatggaacaggtcaatctgttgaagtctgaggtgcgtcgtctggag
cgtaaccatgagagggagaaaagtgtagccaacctggagtatctgaagaatgtcctcctg
cagttcatcttcctgcagtcaggcagcgagagacgggctctactccctgtcatacacacc
atgttacaactcagccctgaggagaagaataaactggctgctatcgcaatgggtgaggag
gaggtgggaggagctaaaggctcaggatggacctcctaccttcacagctggtctggcatc
agataa
DBGET
integrated database retrieval system
