Oncorhynchus tshawytscha (Chinook salmon): 112225540
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Entry
112225540 CDS
T05605
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225540
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112225540
Endosome - Golgi transport
Rab GTPases and associated proteins
112225540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
PH-GRAM_MTMR6-like
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
112225540
NCBI-ProteinID:
XP_024245349
LinkDB
All DBs
Position
LG26:complement(31696196..31713273)
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AA seq
1143 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNDFFILQRRRGHGDSGGKFTGLLVGALDTVLDSNARVT
PFRILLQVPGSQVSWTIACGAAVEDMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGKQAAQEEDPEKFREVLLKFELRFGLPSSEKLVTTYSCCCWKGRVPRHGWLYL
SINHMAFYSFLLGKEVKFVIPWVEVTRLEQVSTGLMTDMVRVTTRRRQRDFSMFLSLDEA
FGVMGQLADIALRRLLDSGGLELDQVLQQSSNITKRVLEEQALRAYVLALFRLPRAECLQ
EVALCSVWTPHARCHTAGTLYTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDSLMSRLRALQWKHSMFHSKKSLTSSSPYYTFYYDT
MYCDGEEIEERPLRHTVNTEALMAYYHHSQPDLNNSTATMEQVKERLWDDHFSAYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDSSSELASHPDYYSGLVTESIGHSSLATEEIE
RDLHRSLPDHPAFQNVTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFW
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIQERLPELAEHIPDLSPLSSLSLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANAAALCASADDGQALMILTGFLDHV
KYDENPSPPAPHPPSSPRGEEECSTTVELHTLITDLIIDSYEKFGDLTVRQLERLRCRHR
IQVLQAHEDITKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGSTTVALQHHD
PGQPYVEQYRVDRAQFKSLYVLLVPWLCGLHTDTVAHRTFTLLDQDRDLLITFRKFAGWL
DTLYCEELNEKIRLLYRLHIPPALTESEDDSPPLKSPLLSTTRPLHIEMPNAPVCVHVEE
EIRDYQEQLKQMLKDLAQEKNVEKPLPLMNQREFIQFCKTLYSMFHGNPDENELFQAIAT
VTSLVLQIGEVGHRSRSEVSSEGGAGDEVEEDHREGSQEDHPVFSTKEGDGEREEGTRKS
SERSESSSEWTVSYAQILASLLTEQQLVNFFEKPLDLSAKVAVAKVKQYHERAGLLMLQQ
GTS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccagaggaagttttgctgaaaaacgcgctgaagctttgggttaccgaa
aaatcaaacgatttcttcattttgcagcgccgaagaggacatggggattcagggggaaaa
tttacaggtcttctggtgggagctctggacacagtgctggactccaacgcccgggtcaca
ccattccgtatcctgctacaggttcctgggtcacaggtcagctggactatagcttgtggt
gctgctgttgaggacatgaacaggcattgggactggctggtccagaatctactccactct
ctctcagtatttgagaacaaggaggatgtcgccagcttcgtcaaagggaaagtcaagggt
ctgatagcagaggaggtgagggggaagcaggcggctcaagaggaggacccagagaagttc
cgggaggtactgctgaagtttgagctgcgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaagggacgcgtcccccgacatggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtgatc
ccgtgggtggaggtgacgaggctggagcaggtctccactggcctcatgacggacatggtg
cgtgtgacaacgcggcggcgccagcgggacttctctatgttcctgagcctggatgaggcg
ttcggggtcatgggtcagctggctgacatcgcactgcgacgcctgctggacagcggaggt
ctagaactggatcaagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcattgagggcgtacgtcctggctcttttccggctaccgcgggccgagtgtctccag
gaggtggctctgtgttcagtgtggacaccccatgcacgctgccacacagctggaacactc
tacaccaccgacagctacctatgcttcgccagtcgagaggagggccactgcagcctgctc
atccccctttcagaggtgatctccatagagaaggctgagagcaccagcctgctgcccaac
ccagtgatcgtcagtgtgaggagtaagaaggcattccagctgatcgagctgcaggacaga
gacagcctggtggatagtctgatgtcacggctcagagccctgcaatggaaacactccatg
ttccacagcaagaaatctctgacgtcctcgtctccctactataccttctactatgacacc
atgtactgtgacggggaggagatcgaggagagaccactacgtcacacagtgaatacagag
gctctgatggcatactaccaccactctcaacctgacctcaacaatagcacggctaccatg
gagcaggtgaaagagcgtctgtgggatgaccacttctctgcgtatggtcgaggtgtccac
atgttccgcacagagaagatccagaagctggttgccatgggaataccagagtcgctacgg
ggagagctatggatgaccttctctgactcatcgtcagagttggcttcccacccagactac
tactcggggctggtgacggagtctatagggcacagcagcctggccacggaggagatcgag
agagatctgcaccgctcgctgcccgaccaccccgccttccagaacgtcacgggcatcgct
gccctacgccgcgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcaatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctgg
ctgctggtggctgtgtgtgagagaatgctgcctgactatttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccaggagcgtcttcccgagttggct
gagcacattcccgacctctcccccctctcttccctctccctgtcctggttcctcaccctc
ttcctcagtgtgcttcccttccgcagcgccgtctgtgtggtagactgcttcttcttccac
ggcatcaaagccatcttccagctagggctagctgtgctggatgcgaacgctgcggcactg
tgtgctagtgcagatgacggccaggccctcatgatcctcactggctttctggaccacgtg
aagtacgatgagaatccgtctccacctgcccctcaccctccctcgtctccgaggggggag
gaggagtgcagcacgactgtagaactacacaccctgatcacagacctcatcattgactcc
tatgagaaatttggagaccttacagtgagacaattagagcggttgcgatgcagacaccgg
atccaggttctccaagcgcacgaggacatcaccaaggagaacgcactcagggtggtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaagacagag
cacttcatcaacctgtactggggtgatgggagcaccactgtggctctccagcaccatgac
ccaggccagccctatgtggagcagtacagagtggaccgggcccagttcaaaagcctgtac
gtgctactggttccctggctgtgtggcctccacactgacaccgtggcccacaggaccttc
acactgctggaccaggacagagacttactcatcaccttcagaaagtttgccgggtggctg
gacacactatactgtgaggaactgaatgagaagatcagacttctgtatcgtttgcacata
cctccagctctgactgagagtgaggatgactctcctccactgaagagccctctgctgtcc
actaccagaccactccatatagagatgcctaatgctcctgtgtgtgttcatgttgaagag
gagatcagagactatcaggagcagttgaagcagatgttgaaggacctggctcaggagaaa
aatgtggagaaaccgctacctctaatgaaccagagggagttcatccagttctgtaagacc
ctctacagcatgttccatggcaacccagatgagaacgagctctttcaggccatcgctaca
gtgaccagcctggtgctgcagatcggtgaggtcggccaccgcagccggtcagaggtcagc
agcgagggcggggccggagatgaggtagaggaggatcacagggaggggagtcaagaagac
caccctgtcttcagcaccaaagaaggagatggagagagggaggagggaaccaggaagagt
tccgagcggtctgagagttcgagcgagtggacggtcagctacgctcagatcctggcctcg
ctcctcacagaacagcagctggtcaacttctttgagaaaccactggacctgtcagcaaag
gtggctgtagcaaaggtgaaacagtaccatgaaagggccggtctgcttatgcttcagcaa
ggaaccagctga
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integrated database retrieval system
