Oncorhynchus tshawytscha (Chinook salmon): 112225550
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Entry
112225550 CDS
T05605
Symbol
nckap1
Name
(RefSeq) nck-associated protein 1 isoform X1
KO
K05750
NCK-associated protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112225550 (nckap1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112225550 (nckap1)
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Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
112225550
NCBI-ProteinID:
XP_024245360
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Position
LG26:complement(32007835..32071610)
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AA seq
1141 aa
AA seq
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MSATLSRGSLQPGQQKLAEKFTILNDRGIGMLTRVYNIKKQGQVWKACGDPKAKPSYLID
KNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCEL
LNTIDACQVFFDITVNFDLTKNYLDLVVTYTNLMMLLSRIEERKAIIGLYNYAHEMTHGS
SDREYPRLGQMIVDYENPLKKMMEEFVPHGKSLSDALLSLQMVYPRRNLSADQWRNAQLL
SLISAPSTMLNPAQSDTMPCEYLSLDAMEKWIVFGFILCHGVLNSDQAALSLWKLALQSS
TCLCLFRDEVFHIHKAAEDLFINIRGYNKRVNDIKECKEQALSHAGLMHRERRKFLRSAL
KELATVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSTDDFIDKHIAELIF
YMEELRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSL
GVKQGVTVEDGDVFDFRGMRLDWFRLQAYTSVSKASLGIADHRELGKMMNTIIFHTKMVD
SLVEMLVETSDLSIFCFYSRAFEKMFQQCLELPSQSRHSISFPLLCTHFMSCTHELCPEE
RHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKK
QTGKKGEPEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMVIWEHTFTPREY
LTSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNN
VLLQQTQHLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNA
EEYSDISEMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVDNVEVLTQMRTSFDKP
GEMAALFKKLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSVEDFKDHIP
RETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSM
PTLASNVMSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLL
KIGQETDKTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVPSS
T
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaacattgtcgcgcggctcgctccaaccaggccagcaaaagctggccgagaaa
tttaccattctgaacgaccggggcatcgggatgctcactcgtgtctataatatcaagaag
caaggacaagtttggaaggcatgtggtgaccccaaagccaaaccatcctatctaatagac
aagaacctggagtctgctgtcaagttcattgtcagaaaattcccagcggttgaaacacgc
aacaacaatcaacagcttgcacaactacagaaagagaagtctgaaatccttaagaatcta
gcgttgtattacttcacattcgtagatgtgatggagtttaaggaccatgtctgtgagctg
ctgaacactatcgatgcttgccaagtattctttgatattactgtaaactttgacctgacc
aaaaactaccttgacttagtagtgacctacactaacctaatgatgctactgtctcggatt
gaagagaggaaagctatcattggcctctacaactatgcccatgaaatgacacatggatca
agtgatcgagagtaccctaggctgggacagatgatcgttgactacgagaaccccctgaaa
aagatgatggaggagtttgttccacatgggaagtcgttgtcagacgccctgctctccctc
cagatggtgtaccccaggagaaacctgtctgctgaccagtggaggaacgcccagctactc
agtctcatcagtgctcctagcaccatgctcaacccagcccagtcagacacaatgccctgt
gaatacttgtccctggacgccatggagaagtggatagtatttggcttcatcctgtgtcat
ggggtcttgaacagcgaccaggcagctctgagcctgtggaagttggctcttcagagcagc
acctgcctctgtctcttcagagacgaggtgttccacatccacaaggctgctgaggacctc
ttcatcaacatccgcggctacaataagcgtgtgaatgacatcaaagagtgcaaagaacaa
gctctgtcacatgcaggcttgatgcacagagaaagacgcaagttcttgaggtctgccctg
aaggagctggccacagtcctatctgaccagccaggattactgggcccaaaggccctgttt
gtattcatggctctgtcgttcgctcgggatgagatcatttggctgctacgacatgcagac
aacatccagaagaagagcacagatgactttattgacaagcacattgcagagctgatcttc
tacatggaggagctgagggctcatgtgaggaagtatggtcctgtcatgcagaggtactat
gtccagtacctgtctggcttcgatgccgtggtgctcaacgagctagtacagaatctgtcc
gtctgtcctgaggatgagtccattatcatgtcctccttcgtcaacaccatgacctccctc
ggcgtcaaacaaggtgttacagtggaagacggggacgtgttcgatttcaggggcatgagg
ctggactggttcagattgcaggcctatactagcgtgtcaaaggcttctctgggcatcgca
gaccaccgtgagctaggaaagatgatgaataccattatatttcacaccaagatggtggat
tccctggtggagatgctggtggagacgtctgacctctccatattctgcttttacagtcgt
gcgtttgagaagatgttccagcagtgtttggagctgccatcccagtctcgtcactccatc
tccttccctctgctctgtacccacttcatgagctgcacccatgagctctgtcctgaggag
aggcatcacataggcgaccgtagcttgtccctgtgcaacatgtttctggatgagatggct
aaacaggcccgcaacctcatcacagacatctgcaccgagcaatgcacgctcagcgaccag
ctgctgccaaaacattgtgccaaaaccatcagtcaggcggtgaacaagaagtcaaagaag
cagacggggaagaaaggagaacctgagagagagaagcctggagtagagagcatgaggaag
aacaggctgctggtcaccaacctggataagcttcacacagcgctatccgagctgtgtttc
tccatcaattatgtacccaacatggtgatatgggaacacaccttcactcccagggagtac
ctcacctcacacctggagatccgcttcaccaagtctatcgtggggatgaccatgtataac
caggcgacccaggagatagccaaaccatctgagctgctgaccagtgtcagggcttacatg
actgtactccagagcatagagaactatgttcagatagatatcaccagggtgttcaacaac
gtgctgctgcagcagacgcaacatctggacagtcacggagaaccaaccatcactagcctc
tacaccaactggtatctggagaccttactgcgccaagtaagtaacggacacattgcttac
ttcccagccatgaaggcttttgtcaacctgcctacggagaacgagctcaccttcaatgca
gaggaatattctgatatctcagaaatgcggtccctgtcagagctgctggggccctatggg
atgaagttcctcagtgagagtctcatgtggcatatctcctcccaggtggctgagctcaag
aaactggtggtggacaacgttgaggttttgacccagatgaggaccagctttgacaagcct
ggagaaatggctgctctgttcaagaagctctcatcagtcgacagtgttctgaaacggatg
accatcatcggcgttatcctctcattccgatcactggctcaggaggcactccgagatgtg
ttgtcgtgccacatcccattcctggtgagctcagtggaggacttcaaggatcacattccc
agagagaccgacatgaaggtggccatgaatgtgtatgagctgtcctctgcagcaggcctg
ccctgtgagatagaccctgccttagtggtggccctctcctcccagaagtcagagaacatc
agtcctgaggaggagtacaagatagcgtgcctgctgatggtctttgtggcggtctctatg
cccaccttggcaagcaacgtcatgtcccagtatagccctgctattgaaggtcactgcaac
aacatccactgtctggctaaagccataaaccagatcgctgcagctttattcaccatccac
aagggcagcatcgaggaccgcctcaaagagttcctcgcacttgcctcctccagtttgctg
aagatcggccaggagactgacaaaaccacaacaaggaacagagaatctgtctacttgctc
ctggatatgattgtgcaggagtccccattcctgaccatggaccttctggagtcttgcttc
ccctatgtgctgctccgtaacgcataccacgccgtctacaagcagagtgtgccttcctcc
acctga
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