Oncorhynchus tshawytscha (Chinook salmon): 112225564
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Entry
112225564 CDS
T05605
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112225564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225564
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112225564
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112225564
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
112225564
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
112225564
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112225564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
ParD_antitoxin
Motif
Other DBs
NCBI-GeneID:
112225564
NCBI-ProteinID:
XP_024245387
LinkDB
All DBs
Position
LG26:33734090..33749184
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AA seq
436 aa
AA seq
DB search
MMADSGPKEVAVIGNTELTSAELDNNIKNTMVEIEKGTSLLRKLEISVAEAEKRTGKNTV
NMQEIYTVYLIETRPVDALTEGITPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKRAE
IVWHKLSADNMDPDFVERRRVGLENFLHRVASHPVLCNDNIFNIFLTEQDKDWKEMVYET
GFQAKADSRLKAVNAAFRVKNPDGRFTELKHYSDELQTVLSQLLRVRARVADRLYGVYKV
HGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYTDAL
RAVCRKHELTQFELEMVALDLACKKQQKEELVTGTVRTFSLKGMTSKLFGQETAEQREAK
LQVLEQQLKEGEEAVKEKNTESDEFVKTAWVDIERFKDQKDRDLKEALISYAVMQISMCK
KGIQVWTNAKECFNKM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactccggacccaaggaagtagcggtgatcgggaacacggagctcacctcc
gcagaactagataacaacattaaaaacacgatggttgagattgaaaaagggacgagtctt
ctacgaaagctggagatcagcgttgcagaggcagagaaaaggactgggaagaatacagtc
aacatgcaggagatatacactgtttatctaattgagacacggccggttgatgctctgaca
gaaggtataaccccagactccttatggcgaagatacagcgagtttgagcttctcagaaac
tacctgttggtcacctatccctttgtcgttgttgccccattacctgagaagagggcagag
attgtgtggcacaagctgtcggcggacaacatggacccagactttgtggagaggagaagg
gttggactggaaaacttcctgcaccgagtcgcctcccacccagttctctgcaatgacaat
atcttcaatatcttcctcactgagcaggataaagattggaaggaaatggtgtacgagaca
ggatttcaagcaaaggctgattccaggttgaaagctgtgaatgcagcattcagggtgaag
aatccagatggaaggtttacagagttgaaacactacagtgacgagctacagactgtactc
tcccagctgctgagagtacgggcgagggtagcagatcgactgtatggggtgtacaaagtg
catggaaactatggacgagtcttcagtgagtggagtgccatagagaaagagatgggagat
ggactacaaagtgctggccatcacatggatgcgtatgctgcttctgtagatgatattctg
gaggaggaggagcactatgctgatcagctgaaggagtacctgttctatactgatgcacta
agggcggtatgcagaaagcatgagttgacacagtttgagctggagatggttgcactggac
ctagcctgtaagaaacagcagaaggaggaactggtcactgggactgtgcggacattctca
ctgaaggggatgaccagtaagctgtttggccaggagactgcagagcagagggaggctaag
ttacaagtgttagaacagcagctaaaggagggagaggaggctgttaaagagaagaacacc
gagagcgatgagtttgtgaagactgcctgggtagacattgaacgctttaaggaccagaag
gaccgggacctgaaggaggccctaattagctatgcggtcatgcagatcagcatgtgcaaa
aagggaatacaagtgtggaccaacgcaaaggagtgtttcaacaagatgtga
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