Oncorhynchus tshawytscha (Chinook salmon): 112225593
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Entry
112225593 CDS
T05605
Name
(RefSeq) vesicle-trafficking protein SEC22a
KO
K08520
SEC22 vesicle trafficking protein A/C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225593
Membrane trafficking [BR:
otw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Putative SNAREs
112225593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
112225593
NCBI-ProteinID:
XP_024245452
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All DBs
Position
LG26:38026090..38053679
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AA seq
304 aa
AA seq
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MMSMVLFASVVRVVDGLPLSASTDYEQDKGLQETKKQVKALSKKLSQFPDRCTLKAGQYN
INFTCSLGVGYLMVCTETYPNVLAFCFLDELQREFIVTYDTKRVNSAVRPYSFIELDNFI
QKTKQRFNSPRSLSTKINLADMQTEIKLRPPYQLSPEDLGSINGFSYHTPSKYKGITPSQ
QLDPVTLPGIVSCVLSILCGGLNLLRGVHAIESTIQNDDEDFNYVIAFFLGTAACLYQCS
LFAYFSVWRNSKSFLAFALICLSNMYLYELRNVWQILFHVTVGAFMTLQIRLRQPQGKAP
DYNV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaatggtcttgtttgcctctgtggtacgggtggtggacggtctacccctgtct
gcctccacagactacgagcaggacaaaggccttcaggaaaccaagaagcaagtcaaagca
ctgtctaagaagctcagccagttccctgaccgatgcactctgaaggctggacagtacaat
atcaatttcacctgctctctgggtgtgggttatctgatggtatgtacagagacctacccc
aacgtcctggccttctgtttcctggatgagctgcaaagggagttcatcgtcacgtacgac
accaagcgtgttaatagcgctgtgaggccatactccttcatcgagttggacaacttcatc
cagaagacgaagcagcgtttcaacagcccccgctctctgtccactaagatcaacctggcc
gacatgcaaacagagatcaaacttcgaccgccctaccagctgtcccctgaggacctagga
tccatcaacggcttctcataccacaccccctccaagtacaagggcataactcccagccaa
cagcttgatcctgtgactctacctggcatagtctcctgtgtgctgagcatcctctgtgga
ggcctcaatctactccgaggggttcatgctatagagagcaccatacagaacgacgacgaa
gactttaattacgtgattgcctttttcctgggcacagcagcctgtctgtatcagtgttcc
ctgtttgcgtacttctctgtgtggaggaacagtaagtcattcctggccttcgccctgatc
tgtctgtccaacatgtacctttatgaactgaggaatgtgtggcagatcctcttccatgtg
actgtaggggccttcatgacactacagatcagactgaggcagccgcagggcaaagctccg
gactacaacgtctga
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