Oncorhynchus tshawytscha (Chinook salmon): 112225613
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Entry
112225613 CDS
T05605
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112225613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112225613
03110 Chaperones and folding catalysts [BR:
otw03110
]
112225613
03029 Mitochondrial biogenesis [BR:
otw03029
]
112225613
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112225613
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112225613
Messenger RNA biogenesis [BR:
otw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112225613
Chaperones and folding catalysts [BR:
otw03110
]
Heat shock proteins
HSP60 / Chaperonin
112225613
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112225613
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112225613
Exosomal proteins of other body fluids (saliva and urine)
112225613
Exosomal proteins of breast cancer cells
112225613
Exosomal proteins of colorectal cancer cells
112225613
Exosomal proteins of bladder cancer cells
112225613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
112225613
NCBI-ProteinID:
XP_024245481
LinkDB
All DBs
Position
LG26:complement(39115759..39122882)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVCRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISTVQSIVPALELANQNRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGQVGEVSVTKDDTMLLKG
KGDTASIEKRQAQIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINSDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAVEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKEEKEGGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctacccacggtgatgagacagatgaggccagtctgcagggccctggccccc
cacctcacccgagcatacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggtcccaagggtcgc
acagtaatcatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacatcggtgccaagctggtccaggac
gtggccaacaacacaaacgaggaagcaggagatggcaccactaccgccaccgtgctggcc
agagccatcgccaaggagggctttgacaccattagtaaaggcgctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcattgctgaactgaagaggatgtctaag
ccagtcaccacacctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaaaaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaactctgcatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctcaccttacttcatcaacacagccaaaggccagaagtgtgagtttcag
gatgcctatgtgttgctgagtgagaagaagatctctactgtccagagcatcgtccctgcc
ctggaattggccaaccagaaccgcaaacctctggtcatcgtggctgaggatgtggacgga
gaggccctcagcaccctggttctcaacaggctgaaggtgggactacaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcacgacatggccgtggccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcacat
gactttggccaggtgggcgaggtgtcagtgaccaaggacgacaccatgctgctgaagggg
aagggagacacggcatccatcgaaaagaggcaggctcagatcgctgagcagctggagaac
accaccagcgattacgagaaggagaagctcaacgaaaggctggccaagctgtctgacgga
gtggctgtgctcaaggtgggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgaccgacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccgggggt
ggctgtgccctgctgcgctcaatccctgccctggatgccctcgtgcccatcaactctgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccggccatgacaattgct
aagaacgctggtgtggagggctctctagtggtagagaagatccttcaggccgcggtggag
atcggctacgatgccatggaaggagagtacgtcaacatggtagagaagggcatcattgac
cccaccaaggtggtgaggactgcactaatggatgctgcaggtgtcgcatcccttctctcc
actgctgagtgtgtggtcacagagctgcccaaggaggagaaagagggtggcatgccagga
ggtatgggcggtatgggaggtatgggaggtatgggcggtggcatgttctaa
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