Oncorhynchus tshawytscha (Chinook salmon): 112225616
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Entry
112225616 CDS
T05605
Name
(RefSeq) DNA-binding protein SATB2 isoform X1
KO
K23226
DNA-binding protein SATB2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112225616
03036 Chromosome and associated proteins [BR:
otw03036
]
112225616
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
112225616
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112225616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112225616
NCBI-ProteinID:
XP_042162554
LinkDB
All DBs
Position
LG26:complement(39455052..39550870)
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AA seq
926 aa
AA seq
DB search
MERGGGESPRMQDSPERERRGGSPELSGPPPGKMGRLERNGSPTGPCLLHHNGNPHGPLG
GLMIPVFCVVEQAGLDGGMQREEVERSEGHREEHAEFVLVRKDILFNQLVETALQALGYS
HSSAAQAQGIIKVGHWNPLPIHFLTDAPEATVADMLLDVYHMVTLHIQLQSFAKLEDLPS
EQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSSYYANVSTAKCQEFGRWYK
KYKKIKGDYQEKMWSGREHSEIKVERDSLADFYVLGQRPPPHLASLIQLSHLRGGGGALL
KGGSGDPPSQPSQQQQQSQQQHPLAPWPAPQQPPLRGQVPPPGPPTSLQPLLGPGGLLSP
QLSPQLVRQQLAMAHLINQQLAVSRLLAHQHPQALNQHFLNHPPIPRPSKAGAPGDPGSN
PSAAEVSIDIYQHVREELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRSASQSLLVN
LKAMQNFLILPEGERDRIYQEERERSINPSVGLPPTPTSSPGGPRLSQDLFRPTITNHVP
YHLMQKVWERGLDEQLTPDAWAAIWKNKTKASSVPKPPGPNPDLPLKLESLVNITSGIYD
EIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLTLSQ
TERDMVYEEESRHHHSERVHTVLHLPQDPQFYCFSHQALHRQLPQPLKHHSPMREDPVPA
QGNEEGSQNVERGGGGGGCTGGPGVGGSMVVKKPRSRTKISLEALGILQSFIQDVGLYPD
QEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGRLKELGEGAGGVDVSEYRDEELLSSSE
DPESSEDGHEEMYPTTEREGGERESNAAGSASSLAPAPGQSSVTSMGAMEESKDKGHSYG
LGGGRASSLPPSSSSSSPREQADFQR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcggtggtggggagagcccccgtatgcaggacagtcctgagcgggagcgacgg
gggggcagcccggaactcagcggaccaccgccagggaagatggggcgtctggagcgcaac
gggagccccactgggccatgtctcctacaccacaacggcaacccacacggacccctggga
ggtctgatgatcccagtattctgtgtggtggagcaggcagggctggacggagggatgcag
cgtgaggaggtggagaggagcgagggccacagggaggagcatgctgagtttgtcctggtc
aggaaagacatcctcttcaatcagctggtggagacggccctgcaggccctggggtactcc
cacagctctgctgctcaggctcagggcattatcaaggtgggccattggaaccctctgccc
atccacttcctaacagacgctcctgaagccacagtggctgacatgctgttggacgtctat
cacatggtcactctccacatacagctacagagctttgccaagctggaggatcttccgtca
gagcagtggaaccacgccacggtgaggaacgctcttaaggagcttctcaaggagatgaac
caaagcacactggctaaggagtgcccactgtcacagagtatgatttcctcgatagtaaac
agctcctactatgccaatgtctccactgccaaatgccaggagtttggacgctggtacaag
aagtataagaaaatcaaaggagactatcaggagaagatgtggtcaggaagagaacattct
gaaatcaaagtggagagagacagcctggcagacttctatgtcctgggccagcgtccccct
ccccacctggccagcctgatccagctcagccacctcagagggggtggaggtgctctcctc
aagggtggctccggggaccccccctcccaaccctcccaacaacaacaacaatcccaacaa
caacaccccctcgccccatggccagcaccacaacagccccctctacgtggccaggtcccc
cctcccggccctccaacctccctccaacctctcctcggcccaggcgggcttctctccccc
cagctcagccctcagctggttcgacagcagctagccatggctcacctcatcaaccagcag
ctagctgttagccgcctgctagcccaccagcatccacaggccctcaaccagcatttcctc
aaccaccctcccatccctcgcccttccaaggcaggggcccctggggaccctgggagcaac
ccgtctgctgcggaggtctccattgatatctaccagcatgtcagggaggaactgaagagg
gccagcgtctcacaggctgtgttcgcccgcgtggccttcaacagaacacagggcctgctg
tcggagattctgcggaaggaggaggaccctcgctctgcctctcagtccctgctggtcaac
ctcaaagccatgcagaacttcctcatcctccctgagggggagagagaccgtatttaccag
gaggagcgtgagcgcagcatcaacccctctgtcggcctgccccctacccctacctccagc
cccgggggcccccgcctctctcaggatctatttagaccgaccatcactaaccatgtccca
taccacctcatgcagaaggtgtgggagagaggtctggacgaacagctcactcctgatgcc
tgggctgctatctggaaaaacaagaccaaagcctcctctgtgcccaagccaccaggcccc
aacccagacctgcccctgaagctggagtctctggtcaacatcacgtcaggtatctatgat
gagatccagcaggagatgaagagggccaaggtgtctcaggcgctgttcgccaaggtggct
gccaacaagagccagggctggctgtgtgagttgctgcggtggaaggagaaccctagccca
gagaaccgtactctgtgggagaacctgtgtaccatccggaggttcctgaccctgtcccag
acagagagggacatggtgtatgaagaggagtcaaggcaccaccacagtgagagagtccac
actgtactacacctgccccaagacccacagttctactgtttttctcaccaggcgttgcac
aggcaactcccacagcccctgaagcaccactcccccatgcgcgaggaccccgtgcccgcc
cagggtaacgaggaagggtcacagaacgttgaaagaggtggtggtgggggtggctgcacg
ggcggcccaggagtcggtggttccatggtcgttaagaagcctcggtcgcgcactaagatc
tctctagaagccctgggcatcctgcagagcttcatccaagacgtgggtctgtaccccgac
caggaagctatccataccctgtcagcccagctggacctgcccaaacacaccatcatcaag
ttcttccagaaccagcgctaccatgtcaagcaccacggccggctgaaggagctgggggag
ggggctggcggcgtggacgtcagcgaatacagagacgaggagctcctctccagctcagaa
gaccctgagtccagtgaggatggtcacgaggagatgtaccccactactgagagggaagga
ggggagagagagagcaacgcagcagggtcagcctcttccctggccccagccccaggccag
tcttcagtgaccagtatgggagccatggaggagagcaaggacaaggggcattcttatggt
ctgggtgggggccgagccagctccctgccccctagtagctcctcatccagtcccagagaa
caggctgacttccagagatag
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