Oncorhynchus tshawytscha (Chinook salmon): 112225626
Help
Entry
112225626 CDS
T05605
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
KO
K15188
cyclin T
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112225626 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112225626 (ccnt2a)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
112225626 (ccnt2a)
Brd4/P-TEFb complex
112225626 (ccnt2a)
7SK RNP complex
112225626 (ccnt2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
112225626
NCBI-ProteinID:
XP_042162578
UniProt:
A0A8C8FHZ3
LinkDB
All DBs
Position
LG26:41410082..41421220
Genome browser
AA seq
663 aa
AA seq
DB search
MAACRGSSSKWFFTREQLEATPSRRTGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVSHACLNPQEAPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHDF
LQILEKTPSRLKRIRNWRATQAAKKPKGDGSQANDPYPGPSLVHEHSLGDGIPGVSNPAF
SKAASSFPVPLPGHASGPLSLDSIASMQGSSYTFTAPSDWPQDMGGRSEGGGYSLKTDTL
GLQQGASLSLQHNSLNPHRPDKTMEFNPIKHEHKAVAGGGKQQQPPPAQKMSLDKYREKH
AAELAVQQKRKQTEQQAMEPEGRDAYISSVQSDHRKHMQPHSNPGSSSSGTTSSPLKMKL
AVLGQDRLPSDKRDKGGSLKLRLPVPSQGGVASKEELKMKIKVSSERHSSSDEGGPKSKH
SSPLVSKEKHRDQSAHRHHKQHGHSQLHAAQHSGNGRGGLEGPVGVGPALLRSPLGLGSV
EGLAGPALASVSSSSRKRAHTNVAGHNHHSSKTSKSSKGGAGGLRTSQHPSETGQEASGE
PRP
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcctcgtcgaaatggtttttcacccgggagcagcttgaagcc
acgccgtcccgccgtacgggagtggagccggatagagagctttcttaccggcagcaggcg
gcaaacctcattcaagatatgggccagagactcaacgtctcacaacttactataaataca
gcaattgtttacatgcatagattttatatgtaccactctttcaccaaattccacagaaat
atcatttctccaaccacattattcctagctgcaaaagttgaagagcaacctcggaaactg
gagcatgtcatcaaggtttcacatgcttgtctaaaccctcaagaggccccgcttgatacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggatttgaaataactattgaacatccacacactgatgtggtgaaatgttcc
cagctagtgagagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccacgttctgcctgcagcacaagcccacagtcatcgcctgcgtctgcatc
cacctggcctgtaaatggtccaactgggagatccccgtctccactgacgggaaacactgg
tgggagtacgtggacaactctgtcacgctggagcttctcgatgaactgacacacgacttc
cttcagattctggagaagacgccgagcaggttgaagaggatacggaactggagggccaca
caagctgccaagaagcccaagggagatggctctcaggcgaacgacccctacccaggaccc
tccctggtccacgaacattccctgggagacggcatccctggggtctccaacccagccttc
tccaaagctgcctcctcgttccctgtcccactgccgggtcacgccagtggacccctctcc
ctggactccatcgcctccatgcagggcagctcctacaccttcaccgcccccagcgactgg
ccccaggacatggggggtcgctcggagggaggaggctattccctcaaaacagatacacta
ggcctccagcagggggcttcactgtctctgcagcacaactctctgaacccacacagacca
gataagaccatggagttcaaccctattaaacatgaacacaaggctgtagcaggggggggg
aagcagcagcagcccccgcctgcccagaaaatgtccctggacaagtacagagagaagcac
gctgccgagctggcggtgcagcagaaacgcaaacagacagagcagcaggctatggagcct
gagggcagggatgcctatatatcctctgtccagtcagaccacaggaaacacatgcagccc
cactctaacccagggagcagcagcagtggcaccacttcatctcctcttaaaatgaagctg
gccgttttaggccaagacaggctcccctctgacaaacgggacaaggggggctcactcaaa
ctccgcctcccagttccttctcaggggggcgtggccagcaaagaggagctgaagatgaaa
atcaaggtgtcctctgagcgccacagctcttctgatgagggtgggcccaaaagcaaacat
tccagcccgctggtgagcaaggagaagcatcgggaccagtctgcccaccgccaccacaag
cagcacggacactctcagctccacgcagcacagcacagcggcaatggccgggggggcctt
gaggggccagtaggtgtcgggccggccctcctccggagccccctggggctagggagcgtt
gaggggttggcgggcccggcccttgcttctgtttccagttcctcccgcaagagggcacac
accaacgttgccggccacaaccaccactcctccaaaacgagcaaaagctccaagggcggc
gcaggtgggctacggacatctcagcaccctagtgaaactggacaagaagccagtggagag
ccgcggccctga
DBGET
integrated database retrieval system
