Oncorhynchus tshawytscha (Chinook salmon): 112225674
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Entry
112225674 CDS
T05605
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112225674
09143 Cell growth and death
04210 Apoptosis
112225674
09144 Cellular community - eukaryotes
04530 Tight junction
112225674
04540 Gap junction
112225674
09142 Cell motility
04814 Motor proteins
112225674
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112225674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112225674
03036 Chromosome and associated proteins [BR:
otw03036
]
112225674
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112225674
04147 Exosome [BR:
otw04147
]
112225674
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112225674
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112225674
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112225674
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112225674
Exosomal proteins of other body fluids (saliva and urine)
112225674
Exosomal proteins of colorectal cancer cells
112225674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
112225674
NCBI-ProteinID:
XP_042162726
LinkDB
All DBs
Position
LG26:complement(49440348..49443777)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTRGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaacgcctgt
tgggagctatactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
actcgtggaggtggagacgactccttcaacaccttcttcagtgagactggagctggaaag
catgtcccccgagccatcttcgttgacctggagcccactgtcatcgatgaggtgaggacc
ggtatctatcgtcagctgttccaccctgagcagctgatcactggtaaagaagatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacattgtgctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtcgac
tacggaaagaagtctaagcttgagtttgccgtttacccagctcctcaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaaccttgacattgag
cgtccctcatacaccaacctcaacaggctcattggtcagatcgtctcttccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccggtcatctctgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgctttgagccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaaaaccaagaggagt
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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