Oncorhynchus tshawytscha (Chinook salmon): 112225744
Help
Entry
112225744 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: dedicator of cytokinesis protein 7-like
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225744
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112225744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
112225744
NCBI-ProteinID:
XP_042163092
LinkDB
All DBs
Position
LG27:complement(12140597..12172015)
Genome browser
AA seq
1857 aa
AA seq
DB search
MVKCLSLKFEIEIEPIFGTLALYDVKEKKKISEDFHFDLNSDQMKGLLRLHTPHTAISTL
ARSAIFSITYPSADIFLVIKLEKVLQQGDIGESCEPYMVMKESDSSKHKEKLEKLRLQAE
TSCSRLGRYRMPFAWTAIHLVNIVSSVGGLERSDPDSDSERKGHGTWNERKKKGFERMSV
GEDMCNFATFRPATLTVTNFFKQEGDRLSDEDLYKFLADMRRPSSVLRRLRPVTAQLKID
ISPAPDSPHYCLSPELLHVKPYPDLRVRPTKEVLEFPARYVYTPHTTYRNLLYIYPQSLN
FSSRQGSVRNIAVKVQFMAGEDPSLAMPVIFGKSSCAEFFTEAYSPVIYHDKSPEFYEEV
KMKIPANLTDNHHLLFTFYHISCQPKQNTPLETPVGYTWIPLMQHGRLRTGSFSLPVSVE
KPPPSYSVLTPDVQLPGMKWVDNHKQVFNVEVTAASSVHTQDPHLDKFFTLCYVLEEYSF
PFRLKDCIISEANVEGELKASMTGLRGALLDTCVRFLHQLLSKLILLIVHPPVIAGQIVN
LGRAAFEAMSLLINQIHKNLEGNQDQHGRNNLLASYIHYCFHLPTAEPAMPPTGGATPAY
ELPIQYATLSRTTARPSTLHLARSKSISNSNPDLASTPTSPDEEVQRIIGSKGIDRSHSW
VNSAYAPGGSRAVLRRNPNFTCELKQASDRGCNRMSAFVDSATFCSAPTRQIAKKLLHEE
LALQWVVSTSTVREAALQQAWFFFQLMTKSMSHHLFLSSRIDLPRRQRFPDRFVDDIAAL
VGAISADVAGRYHKDVELVERLNSSLAFFLNDLLSLMDRGFVFNLIRSYYKQIANKFHTA
QNPSSLTALRMDFTRIVCSHEHYVTLNLPCSTLSPPASPSPSTSSTTSQGSAFSSMHQDQ
GVASMFELSVPFRQQHFLSGLLLTELSLILEPDGEGVFFLHKKAISAVHSLMCSHDADPR
YTDPQVRTHIAQLYLPLIPIVMDTLPQLHDFTDTSPARGRHAPAMQDDGDPDNGTISQSV
AMAIAGSPLPHAKAPNFTMPTVAGRQCSSLSAECSRTLLVSFLWVLKNADAALLESWVSD
LSVLQINRLLDLLHLSVSCFEYKGKKALERINSLTFKKSQDMKARLEEAILGTIGARQEM
VRRCRERSPYGNENVRWRKNVTHWRQNTDRVDKTKTETEQESVVDGNLATEASLVVLDML
EIIVKTVLASELKESVLGGVLRVLLHSMAGSQSAFFLQHCFTTQRGLVFKFPEMLFEEDT
ELCADLCLRLLRHCSSSVGSVRSQASASLYLLMRQNFEIGNNFARVKMQVTMSLSSLVGT
SQNFNEEHLRRSLKTILTYAEEDLELRDSPFPEQVQDLVFNLHMILTDTVKMKEHQQDPE
MLIDLMYRIAKGYQNXPDLRLTWLQNMAGKHSERGNHAEAAHCLVHSAALVAEYLNMLED
CRYLPIGCVTFQHISSNVLEESAVSDDILSPEEEGICAGKYFSEVGLVGLLEQAATSFHM
ASMYEAINEVYKILLPVHEANRDFKKLATVHGKLQDAFNKIYNQSSGWERMFGTYFRVGF
YGCRFGDLDEQEFVYKEPSITKLAEISYRLEEFYAERFGDDVVEIIKDSNHVDKNKLDPN
KAYLQITYVEPFFDTYELKERITYFDKNYNLRTFMYCTPFTLDGRAHGDLHEQYKRKSIL
TTSHAFPYIKTRVNVIHKEEIILVPMEVAIEDMQKKTQELAFATHQEPADAKMLQMVLQG
SVGTTVNQGPLEVAQVFLSDIPDDPKLYRHHNKLRLCFKDFTKRCEDALRKNKTLIGPDQ
KEYHKEMERNYNKLKESLGPLITRKIPQLYRTLPAAGLQSATQRNSFSRSSLRRGDC
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtgtctgtccctcaaatttgaaatagaaattgagccaatatttgggactctc
gctctctatgatgtcaaggaaaagaaaaagatctcagaggacttccactttgacctgaac
tcagatcagatgaagggtttgttgcgtctccacacaccccacacagccatctccaccctg
gcccgctcagccatcttctccatcacctacccctctgcagacatcttcctggtcatcaag
ctggagaaagtccttcagcagggagacataggggaatcctgtgaaccctacatggtcatg
aaagagtcggactcatcaaagcacaaggagaagctggagaagctgcgactgcaggcggag
acgtcgtgtagcaggctggggaggtacaggatgcccttcgcctggacggccatccacctg
gtcaacatcgtcagcagtgtgggggggctggagcgctctgaccccgactctgactctgag
cggaaaggccatggaacatggaacgagagaaagaagaaagggtttgagcggatgagtgtg
ggagaggacatgtgtaactttgccaccttccgtccagccactctcacagtcaccaacttc
ttcaaacaggagggggacaggctgagtgatgaagacctctacaagtttctggcagacatg
cgcagaccatcctctgtcctacgcagactgagacctgtcacagcccagttgaagatagac
atctctccagccccagactctcctcactactgcctgtctcctgagctgctccatgtcaag
ccctatcctgacctgagggtgcgccccaccaaggaggtgctggagttccctgcccgctat
gtctacacccctcacaccacctacaggaacctgctctatatctacccccagagcctgaac
ttcagcagtcggcagggctcagtcaggaacattgctgtcaaggtgcagttcatggcagga
gaggatcccagtttggccatgccggtgatctttgggaaatccagctgtgctgagttcttc
acggaggcttattcacccgtcatctaccatgacaagtctccagagttctatgaggaggtg
aagatgaagattccagccaacctgacggacaaccaccacctcctgttcaccttctaccac
atcagctgtcagcccaaacagaacacgcccctggagacccccgtgggatacacctggatt
cctctgatgcaacatggccgcctacggaccggttccttcagtctgcccgtctctgtggag
aaaccaccacccagctactccgtcctaacccctgacgtgcagcttccaggcatgaagtgg
gtggataatcacaagcaggtgttcaatgtggaggtgacagctgcctcctcagttcacact
caggacccccacctggataagttcttcaccctctgttacgtcctggaggagtactcgttc
ccgttccgtctgaaggactgtatcatcagtgaggccaacgtggagggtgagctgaaggcc
agcatgacgggcctgcggggggcgctactcgacacctgcgtccgcttcctccaccagctg
ctctctaaactcatcctgctcatcgtccacccgcccgtcatcgcaggacagatcgtgaac
ctgggccgtgcagcattcgaggccatgtccctgctgatcaaccagatccataagaacctg
gaggggaaccaggaccagcatggcaggaacaaccttctggcctcctacatccactactgc
ttccacctgcccactgccgagcctgccatgccccctactgggggtgccaccccggcctac
gagctgcccatccagtacgccacgttgtccaggacaacggcccgccccagcaccctgcac
ctggcccgctccaagagcatcagtaactccaaccctgacctggccagcacccccacgtca
cctgacgaggaggtgcagaggatcatcggcagcaaggggatagaccgctcccactcctgg
gtaaactctgcttatgcccctgggggctccagagctgtgctacgccggaaccccaacttc
acctgtgagctcaagcaggcaagtgatcgtggctgcaatcgcatgtctgcctttgtggac
agcgccaccttctgttcagctccaacaagacagattgccaagaagctgctccatgaggag
ctggcactacagtgggtggtgagcaccagcacagtgagggaggcagcactgcaacaggcc
tggttcttcttccagctcatgacgaagagtatgtcccaccacctgttcctgtcctcccgg
atagaccttcccagacgccagcgcttcccagaccgctttgtggatgacatcgctgctcta
gtgggggctatcagtgctgatgtagcagggcgataccacaaggatgtggagcttgtggag
aggttgaacagcagtctggccttcttcctgaatgacctgctgtctctcatggaccgtggc
tttgtcttcaacctcatccgctcctactacaaacagattgccaacaagttccacacagcc
cagaaccccagctctctgactgctctgagaatggacttcacccgcattgtgtgcagccat
gagcactacgtcaccctcaacctaccatgctccaccctcagcccccccgcctcgccctcc
ccctccacctcctccaccacctcccagggttcagcgttctccagtatgcaccaggaccag
ggtgtggccagtatgtttgagctctccgtccccttcagacagcaacacttcctgtctggc
ctgctgctgactgaactatccctcatcctggagcctgatggggagggggtgtttttcctg
cataagaaggccatcagtgcagtccactctctgatgtgcagtcatgatgcggaccctcgc
tacacggacccccaggtgcgaacccacatcgcccagctctacctgcccctcatccccatc
gtcatggacaccctgccccagctccatgacttcacagacacttctcccgcccggggccgc
cacgcccccgctatgcaagacgacggagacccagacaacggaaccatcagtcagtctgtc
gccatggcgatcgctggctccccgctgccgcatgccaaagcccccaacttcaccatgccc
acggtggctggtcgtcagtgcagctctctgtcggcagagtgcagtaggactctgctagtg
tctttcctgtgggtcctgaagaatgcagacgctgcgctgctggagagctgggtgtcagac
ctctctgtgctgcagatcaacaggctgctagacctgctgcacctctcggtgtcctgcttc
gagtacaaggggaagaaggctctggagcgtatcaacagcctgacgtttaagaagtctcag
gacatgaaggctcgtctagaggaggccatactgggaaccatcggagcccgacaggagatg
gtccgtcgctgcagagagcggagtccatatggcaatgagaatgtcagatggcggaagaac
gtcactcactggagacagaacaccgaccgagtcgacaaaactaagacggagacggagcag
gagtccgtggtggatggaaacctggccactgaagcctctctggtcgtcctggacatgctg
gagatcatagtgaagactgtgctggcgtcggagctgaaggagagtgttttgggcggggtg
ttgagagtcctcctccacagcatggcagggagtcagagtgccttcttcctgcagcactgc
ttcactacacagaggggactggtcttcaagttcccagagatgctgtttgaggaggacaca
gagctgtgtgctgacctgtgtctgcgtctgctccgccactgcagcagcagtgtgggctct
gtccggagtcaagcctccgcctccctctacctgctaatgaggcagaactttgagatcggc
aacaactttgcccgggtgaagatgcaggtcaccatgtccctgtcctccctggtggggaca
tctcagaacttcaacgaggagcacctccgacgttccctaaaaaccatcctgacctacgca
gaggaggacctggagctacgggactccccgttcccagaacaggtccaggatctggtcttc
aatctgcacatgattctgactgacacagtcaagatgaaggagcaccagcaggaccctgag
atgctcattgatctcatgtacaggatcgctaagggctaccagaacntccctgacctgcgc
ctgacgtggctgcagaacatggcggggaagcactcggagagagggaaccacgcggaggca
gcccactgcctggtgcacagcgccgccctggtggcagagtacctcaacatgctggaggac
tgccgctacctgcccattggctgtgtcaccttccagcacatctcatctaatgttctggag
gagtcagcggtgtctgatgacatcctgtccccggaggaggagggtatctgtgcggggaag
tacttcagcgaggtggggctggtggggctgctggagcaagctgcaacctccttccacatg
gcttccatgtacgaggccatcaacgaggtgtataagatccttctcccggtccacgaggcc
aacagagacttcaagaagctggctactgtccatggaaagttgcaggacgcctttaacaaa
atctacaaccagagttctggatgggagaggatgtttgggacctacttccgggtgggcttc
tacggctgtcgctttggggacctggatgagcaggagtttgtgtacaaggagccctctatc
accaagctggctgagatctcctacagactagaggagttctatgctgagcggtttggagat
gatgtggtggagattatcaaggactccaaccatgtggacaagaacaagctggaccccaat
aaggcctacctccagatcacctatgtggagcccttcttcgacacctacgagctgaaggag
aggatcacctacttcgacaagaactacaacctgcgcaccttcatgtactgcacccccttc
accttggacgggcgcgcccacggggacctgcacgagcagtacaaacgcaagtccatcctc
accacgtcccacgctttcccttacatcaagacacgcgtcaacgtcatccacaaagaggag
atcatcctggtgcccatggaggtggctatagaggacatgcagaagaagacccaggagctg
gccttcgctacccaccaggagcctgccgacgccaagatgctgcagatggtgctgcagggc
tctgtgggcactactgtcaaccagggccctctagaggttgcccaggtctttctctctgac
attcctgatgaccccaagctgtaccgtcatcacaacaaactacgcctctgctttaaagac
ttcactaagaggtgtgaggatgccctgaggaagaacaagactctgattggtccagaccag
aaagagtaccacaaggaaatggagaggaactacaataagctgaaagagtctctgggacct
ctcatcacccgcaagatcccccagctctacaggacactgccggctgcaggacttcagtct
gctacacaaagaaattccttcagtaggtccagtctccgtaggggggactgttga
DBGET
integrated database retrieval system
