Oncorhynchus tshawytscha (Chinook salmon): 112225813
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Entry
112225813 CDS
T05605
Name
(RefSeq) interferon alpha-3-like
KO
K05414
interferon alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04217
Necroptosis
otw04620
Toll-like receptor signaling pathway
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
otw04623
Cytosolic DNA-sensing pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112225813
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112225813
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112225813
04621 NOD-like receptor signaling pathway
112225813
04622 RIG-I-like receptor signaling pathway
112225813
04623 Cytosolic DNA-sensing pathway
112225813
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112225813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112225813
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Interferons
112225813
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
TBX2-3_RD
Motif
Other DBs
NCBI-GeneID:
112225813
NCBI-ProteinID:
XP_024245673
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All DBs
Position
LG27:complement(4043929..4044985)
Genome browser
AA seq
187 aa
AA seq
DB search
MAHQTITWMSAFLCLAQVFSMPMPCKLQRHLVGTTYILLRDMGGHFPLECLQENVFMAFP
ATAFASSGAPQLSSSAAKSIYETLKNIDTLFGTDELPTMWDQQKLEYFQNIIYRQIEESE
CMMGSVDTRDYLIRAKMLNNYFRNIAEVLKEKNFTYCAWEVVRKELLYTLEFILIHHSDS
LLWSNRT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcagactatcacttggatgagcgccttcctctgcctcgcgcaagttttctcg
atgcccatgccttgcaagctacaacgacatcttgtgggaacaacctacattctactgaga
gacatggggggtcattttcctctggagtgcctgcaggagaatgtcttcatggcattccca
gccactgctttcgcatcctccggggcgccacagttgagcagcagtgcagctaagtctata
tatgaaacattgaagaacatcgacacattgtttggaactgacgaactgccgacaatgtgg
gaccaacagaagttggagtattttcagaacattatctaccgtcagattgaagagagcgag
tgtatgatggggagtgtggacacacgtgattatctaatcagggcaaagatgctgaataac
tactttaggaacatcgcggaagtcctaaaagaaaaaaatttcacttactgcgcctgggaa
gtggttcgaaaagaactcctgtacaccctagaattcattctgatacaccactctgacagc
cttctgtggtccaacagaacatga
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