Oncorhynchus tshawytscha (Chinook salmon): 112225820
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Entry
112225820 CDS
T05605
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112225820
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112225820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
eIF2A
MIOS_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
DUF7160
Motif
Other DBs
NCBI-GeneID:
112225820
NCBI-ProteinID:
XP_024245685
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All DBs
Position
LG03:complement(4991577..4998470)
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AA seq
476 aa
AA seq
DB search
MSETERARDKPRDQSTGSKQSLAPLKMSAPREDMLPNDGEVEEMEGGGSDEDEMEEEGKD
GEQETQVYVPGKQPLQPGEELEMDRSAYRMYHECQTGAPCLSFDVLRDANGDGREQYPLS
MLLCAGTQADAALSNRLLLIRMHNLHGTTEKVKDGDESSDGESDEEDDDEDKKPQMELAM
MPHYGGINRVRVTHRGDQSLAAVWSEKGQVEIFDLRSQMEAVYSSAAMSTFVKQQKEATP
LFSFSGHMTEGFAIDWSPKVPGRLVSGDCKKNIHVWEPQEGGTSWQIDQRPFSSHTKSVE
DLQWSPTEATVFASCSVDQSIRVWDTRAPPNSMLCAKEAHSSDVNVISWNRTEPFLLSGG
DDGLLKVWDLRQFQSGRPVANFKQHSAPVTSVEWNPVDSSVFAASGADDVVSQWDLSVES
SDVGAREGGVKDLPPQLLFLHQGQTEVKEIHWHPQIPGVMVSTALSGFNVFRTISV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacagagcgagcgagagacaaaccacgtgatcaatccaccggaagtaagcaa
agcctggcccctctcaaaatgtcggcgcccagagaagacatgcttccgaacgatggagag
gtggaggaaatggaagggggtggcagcgacgaagacgaaatggaagaagagggaaaggat
ggagaacaggaaactcaagtatatgtccccggaaaacagcctctccaacccggagaggag
ctcgagatggaccgctcggcttaccgcatgtaccacgagtgtcagacaggtgctccttgc
ctgagcttcgacgtgttgagagatgcgaatggagacggcagggaacagtatcccctctct
atgctgctctgtgcaggcacacaggctgacgctgccctcagcaacagactgcttctcata
cgcatgcacaacctccacggtactacagagaaagtgaaggatggggacgagagcagtgat
ggagagagtgatgaagaggatgatgatgaagataagaagccacagatggagttggccatg
atgcctcactacggagggatcaacagagtccgagtgacccatcgtggagatcagtcattg
gctgctgtctggtcagagaaaggtcaggtggagatatttgacctccgatcccagatggaa
gcggtctacagttcagctgccatgtcaaccttcgtcaaacagcagaaggaagccacgccc
ctcttcagtttctcgggtcacatgactgagggctttgccattgattggtcgcccaaagta
cccggtcggctggtcagtggcgactgcaaaaagaacatccacgtgtgggaaccacaggag
ggagggacttcctggcagatcgaccaacggcctttcagttctcacaccaagtctgtggag
gacctgcagtggtcacccacagaagccactgtttttgcatcctgctctgtggatcagtcc
atccgggtctgggacaccagagccccgcccaactccatgctatgtgccaaggaagcacac
tcctcagacgtcaacgtcatcagttggaacaggactgaaccattcctcctgtccggcggg
gacgacggacttctgaaagtttgggacttgaggcagttccagtcgggccggccggtggct
aacttcaagcagcacagcgcgccagtgacatcagtagaatggaaccctgtggactccagc
gtgttcgccgcctctggagcggacgacgtggtcagccaatgggacctatcagtagagtca
agtgatgtgggtgcgagggaggggggggtgaaggacctgcccccccagctgctgttcctg
caccagggtcagacagaggtcaaggaaatccattggcacccgcagatacccggggtgatg
gtctctactgctctgtcaggcttcaacgtgttcaggaccatctctgtatag
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integrated database retrieval system
