Oncorhynchus tshawytscha (Chinook salmon): 112225922
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Entry
112225922 CDS
T05605
Symbol
hoxb3a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-B3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112225922 (hoxb3a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112225922 (hoxb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
112225922
NCBI-ProteinID:
XP_042163193
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All DBs
Position
LG27:complement(5543150..5554338)
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AA seq
418 aa
AA seq
DB search
MQKTTYYDNSTLFGGYSYQGANGFGYDAPQPAFQSAAHLEGDYQRSACSLQSLGGNSAPP
QQHAKTKELNGSCMRPSLPPEHQPPPQVSPPVIPANATSSSATATSSSATAQQPGGSGGA
AKSAPKTYTLSTNPTLNKQIFPWMKESRQNTKQKNSSPSASSANAESSGGEKSPPGSAAS
KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK
CKGLGSSSGGPXPTGSPPLPMQSSAGFMNSMHSMAGNYDAPSPPSFNKSHQNAYAMSSAY
QNPMKXCPSQQKYANTAPEYDPHGLQGNSGNYGTPNMQGSPVYVGGNYVESMPTSGPSMY
GLNHLPHHQAGNMDYNGATQMSASQHHGPCDPHPTYTELAAHHPSQGRIQEAPKLTHL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgacctactacgacaactcgacgcttttcggaggttactcgtaccaaggg
gccaacggctttggctatgatgctcctcaaccggccttccagtccgcggctcacctcgaa
ggcgactaccagaggtccgcctgctcgctgcagtccctcggtggcaacagcgctcctccc
cagcagcatgccaagacgaaagagctgaatggcagctgcatgcggcccagcctgccacct
gaacaccaacctccaccccaggtgtcccctcccgtcatccccgccaacgccaccagcagc
agtgccaccgccaccagcagcagtgccaccgcgcagcagccgggaggcagcggtggggcc
gccaaatcagcgcccaagacgtacactctgtccaccaaccccaccctcaacaagcagatc
ttcccctggatgaaagagtcgaggcagaatactaagcaaaaaaacagctcgccaagtgca
agttcagctaacgcagagagcagcggaggtgaaaaaagccccccgggttccgcagcctca
aagagagcgcgcaccgcatacacgagcgcgcagctggtggagctagaaaaggagttccat
ttcaaccgttacctgtgtaggcctcgccgcgtggaaatggccaacttgctcaacctcagc
gagcgccagatcaagatttggttccagaaccggcgtatgaagtacaaaaaggatcagaaa
tgtaaagggctgggctcttcatcagggggccctnctccaaccggaagcccacccctaccc
atgcagtcctcagctggcttcatgaactccatgcattccatggcaggcaactacgacgcc
ccctccccgccatcttttaacaagtcccatcaaaacgcatatgccatgtcctcagcctac
caaaaccccatgaaanactgcccctcccaacagaagtatgccaacacagcaccagaatac
gacccacacgggctacagggtaacagtggcaactatggaactcccaacatgcagggcagc
cccgtgtatgtgggaggaaactacgtggagtcgatgcccacctctgggccgtccatgtac
ggcctcaatcatctaccacaccaccaggctgggaacatggactacaacggtgccacgcag
atgtcagcaagccaacaccacggaccgtgcgacccccacccgacatacacagagctggca
gcccaccatccttctcagggtagaatccaggaagctcccaagttaactcatctgtag
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