Oncorhynchus tshawytscha (Chinook salmon): 112225975
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Entry
112225975 CDS
T05605
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03266
Virion - Herpesvirus
otw04081
Hormone signaling
otw04145
Phagosome
otw04148
Efferocytosis
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
112225975
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112225975
04512 ECM-receptor interaction
112225975
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112225975
04148 Efferocytosis
112225975
09144 Cellular community - eukaryotes
04510 Focal adhesion
112225975
09142 Cell motility
04820 Cytoskeleton in muscle cells
112225975
04810 Regulation of actin cytoskeleton
112225975
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112225975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112225975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112225975
04515 Cell adhesion molecules [BR:
otw04515
]
112225975
04090 CD molecules [BR:
otw04090
]
112225975
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
112225975
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112225975
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112225975
CD molecules [BR:
otw04090
]
Proteins
112225975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
112225975
NCBI-ProteinID:
XP_042163289
UniProt:
A0A8C8GTY7
LinkDB
All DBs
Position
LG27:complement(7660733..7678811)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFLDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGGLEFPFSTLSVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMRDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELNLSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNHTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPDDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAANCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttttttagaccgtctatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacgtctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaagggggggctagag
ttccccttcagtaccctcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gctgccgacgacgtcacccagatcagaccccagaaactcagcctcactctgcgaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgagggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggttttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagccgtcagtaac
ccttgttatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcacagaggaggtggcaaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctagacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccatctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtgatg
cccctctaccagaactacagccagctgattcctggcaccacggttggaacgctgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctgaatctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggcaaggttacgcggttgccctaaggagaagaaccataccttcacc
attaaacctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccagggcaactgcagccccaaacctgatgaccccatctgc
agtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgaatgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgcgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaagtgggatacggctaacaaccccttgtacaaaggagccaccaccactttcacgaat
gtgacctaccgtgggaactcttga
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