Oncorhynchus tshawytscha (Chinook salmon): 112225977
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Entry
112225977 CDS
T05605
Name
(RefSeq) kelch-like protein 11
KO
K10449
kelch-like protein 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112225977
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112225977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Calicin
BACK
BTB
Kelch_1
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Kelch_FKB95
NANM
Kelch_2
Beta-prop_TYW4
Beta-prop_FBX42
BACK_BPM_SPOP
BTB_KLHL33
BACK_BTBD8
Motif
Other DBs
NCBI-GeneID:
112225977
NCBI-ProteinID:
XP_024245906
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Position
LG27:complement(8055914..8060459)
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AA seq
704 aa
AA seq
DB search
MCVCVCVLSHTSLLQFRILTTTARMAAAPPNPDDSSRGSSGSSTPSVLVGDGDTEEAEDF
TSSSHCTELSRRQNEQRKQGLFCDVTLAFSSGAATGNVQSCEFSAHRSVLAAATDYFTPL
LGGQFSESLSGRVEMKEWSAELGPDPETVESVIQYMYTGEIRVSTCNVHEVLELADRFLL
LHLKEFCGEFLKKKLTLANCVAVHSLAHMYTLDQLALRAADMIRRNFHKVIQDEEFYTLP
FHLVRDWLSDAEITVDAEEVLFEAVVKWVQRNTEQRGRYFEELFRLLRLPQIKPTYLTRV
VKNEALVAANEACLRLVSDAVEGHAIRCENLKSADLEFWSSYMASFQPRFGQNMDVIMVV
GGVSEGGDYLSECVGYFIYEDRWVNLPHIHNHLDGHAIATTESHIYVAGSMEPGFAKTVE
RYNPNRNTWEQVSNLTTRKHSFGLTCIKDILYSIGGHGNFSPGFKDVSVYEPEPDKWHNL
ESAPKILRDVKAVSVEDRYVYVTARTPVDTDNEDGLKTVTTRYDTESRQWQDVDSLPLID
NYCVFQMAVAPTNFYHTASCCPKSYTVRDEAAKQKISAHISDEILESLPPEVTSIEGAAI
CHFDEDVFVIGGWKNSDDVDKQYRKEAYRYSAERKRWMLLPPMPQPRCRATACHVRIPYR
FLYGCQRYPMPQNLARQRDRMQQMQQLHRRTLTLRRQLQSQIEC
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtctgcgtgtgtgttctttcccacacgagtttactgcaattccgaattctcaca
accaccgccagaatggcagctgcacccccgaacccagacgactctagtcggggtagtagc
ggtagcagcacgcccagcgtccttgtcggggacggggacacggaagaggccgaggatttc
acctcctcctcccactgcacagagctgtctcggcggcagaacgaacagaggaagcaggga
ttgttctgcgacgtgacgctggcattcagcagtggggcggcaaccgggaatgttcagagc
tgtgagttttccgctcaccgttctgtactggccgcggctacggactatttcacgccgttg
ctgggagggcagttctccgagtcgctgtcgggtcgggttgagatgaaggaatggagcgct
gaattgggaccagacccggagacggtggagagtgtcattcagtacatgtacacgggagaa
atacgtgtgagcacctgcaatgtgcatgaagtgttagagcttgctgacaggttcctgctg
ctgcacctgaaggagttctgtggggagttcttgaagaagaagctgacactggccaactgt
gtggcggtgcacagcctggcccacatgtacaccctggaccagctggctctgcgggccgca
gacatgatccgacgcaatttccacaaggtcatccaggatgaggagttctacaccctgccc
ttccacctggtgagggattggctgtctgacgcagagatcaccgtggacgcggaagaggtg
ctgtttgaggctgtggtgaagtgggtccagaggaacacagaacagcgggggaggtacttt
gaggagttgttccgtctcctccggctaccccagattaagcccacctatctgacgcgcgtg
gtgaagaacgaggcactggtggcggccaacgaggcctgtctccgcctggtgtccgatgcc
gtggagggccacgccatccgctgtgagaacctcaagtcagctgacctggagttctggtcg
tcctacatggcctccttccagccgcgcttcggccagaacatggacgtgatcatggtggtg
ggcggggtgtctgagggcggcgactacctgagtgaatgtgtgggttacttcatctacgag
gaccgctgggttaacctgccccacatccacaaccacctggatggccacgccatcgccacc
acagagtcccacatctacgtagcgggatccatggaaccgggcttcgccaagaccgtggag
cgctataaccccaaccgcaacacctgggaacaggtgagcaacctgaccacacgtaaacac
tcctttggtctcacctgtatcaaggacatcctgtatagcatcggtggccacggcaacttc
agccccggcttcaaggacgtgagcgtgtacgagcctgagccggacaagtggcacaacctg
gagtcggcgcccaagatcctgcgggacgtgaaggcagtgagtgtggaggaccgctacgta
tacgtgacggcgcgcaccccggtggacacagacaacgaggacgggctgaagacggtcacc
acacgttacgacacagagagccgccagtggcaggacgtggactccctgccgctcatagac
aactactgtgtgttccagatggccgtggcccccaccaacttctaccacacggcctcgtgc
tgccctaagagctacacggtgcgggacgaggccgccaagcagaagatcagcgcccacatc
tcagacgagatcctggagagcttgccgcccgaagtcaccagcatcgagggcgccgccatc
tgccacttcgacgaggacgtgtttgtgatcggcggctggaagaacagcgatgacgtggac
aagcagtaccgcaaagaggcctaccgctactctgccgaaaggaagcgctggatgctgctg
ccgcccatgccccagccccgctgccgtgccaccgcctgtcacgtacgcatcccctaccgc
ttcctgtacggctgccagcgctaccccatgccccagaacctggcccgccagcgggaccgt
atgcagcagatgcagcagctacaccggcgcaccctcaccctgcgcaggcagctgcagtct
cagatcgagtgctga
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