KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112225986
Entry
112225986         CDS       T05605                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137  Mitophagy - animal
otw04144  Endocytosis
otw04145  Phagosome
otw04148  Efferocytosis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112225986
   04145 Phagosome
    112225986
   04137 Mitophagy - animal
    112225986
   04148 Efferocytosis
    112225986
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112225986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112225986
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112225986
   04031 GTP-binding proteins [BR:otw04031]
    112225986
Membrane trafficking [BR:otw04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    112225986
 Endosome - Lysosome transport
    112225986
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112225986
  Exosomal proteins of other body fluids (saliva and urine)
   112225986
  Exosomal proteins of colorectal cancer cells
   112225986
  Exosomal proteins of bladder cancer cells
   112225986
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    112225986
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 112225986
NCBI-ProteinID: XP_024245925
UniProt: A0A8C8GXX2
LinkDB
Position
LG27:complement(8440980..8456336)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaagctgccatcgtggtc
tatgacatcactaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaatatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaatgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggctggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggaagcaagtgctgtggtgggaactaa

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