Oncorhynchus tshawytscha (Chinook salmon): 112226060
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Entry
112226060 CDS
T05605
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226060
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Ferlins
112226060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
112226060
NCBI-ProteinID:
XP_042163486
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All DBs
Position
LG27:11471440..11522944
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AA seq
2052 aa
AA seq
DB search
MLRVVVESAKGIPKKKLGHPDPIAAVVFKGEKKKTKAIDSELNPVWNEVLEFDLKGSPLD
ASSFLDVIVKDYETIGKDKFIGSAKISLLDLAHGHTKSLPAKNLSLVNEKKQDTGATINL
MIGYEPPASTTPNPNNQTDEDQSYGDTGGGEEGEDREEVSLGGQVGTPGVPPTPGQPGNP
NQRPVRTSRKRHRALANKPQDFQIRVRVIEGRQLPGNNIKPVVKVNVCGQTHRTRIRRGN
NPFFDEMFFFNVNILPSELLDDCISIRVYDSYSLRADSLMGEFKLDVGYIYDEPAHAIMR
KWLLLSDPDDSSSGAKGYLKVSLVIVGTGDEPPTEKRERNEEQDDIESNLLVPAGVTLRL
VTLNLKVYRAEDMPQMDDAFVQTVKQVFGGEGDKKNLVDPFLEVSFAGKKLCTKIIEKNA
NPEWNQLINLQVKFPSMCESIKLTVFDWDRLTRNDVIGTTFLNLTKIASSGGEIEDTPAE
NCTNLSSEVSSGEAEVGFLPAFGPCYLNLYGSPREFTGLPDPYEELNFGKGEGVAYRGRV
LIELSTQLEGKADRKLDNISSDDILVAQKYQRRRKFSLCAVFHSSCMLQEPGEPIQFEVS
IGNYGNKLDSTCMPLSSTTQYSCAVFDGNHYYYLPWADTKPVVILTSFWEDISHRLDSVN
IILYIADRLESNLTSLRTAILAKASEVRLAEIWLKLINHMIEDLSNFQVPDLEGRPNLTA
LDVQIKKLRDSAVAIIREMAKRLKEEATDVIATLTDIEDWLERLKQLAEEPQNSMPDVVI
WMLRGERRVAYARLPANQILYSTYSEQACGKYCGRTQTIFMQYPMDKNKGVKIPVQLRVN
MWLGLSAHEKKFNSFSEGTFSVFAEMYENQAQVFGKWGTTGLVCRHKFSDVTGKVKLKQE
RFMPPRAWEWEGEWFVDPERGLLTEADAGHTEFTDEVFQNETRFIGGEWKPAADPFTDVN
GQKSQSPGEIECPAGWKWEDDWSFDSNRAVDEKGWEYGVTIPPDDKPKSWGAAEKMYHIH
RRKRLLRPRRKIADTKAAPERRDPGEGWEYSSLIGWKFHRKERSSDTFRRRRWRRKMAPS
DGIGASAIFRLEGALGVDVDEKASKKDAARLFGANTPTVSCNFDRSYMYHLRVYVYQARN
LIAMDRDSFSDPYAHVSFLHVSKTTEVIRATLNPTWDQTLIFNDIEIYGDPQTIALNPPN
VVLELYDSDQVGKDEAMGRCTCPPVVKLNLGTVVSPKLLWFPVTKKGRSAGEMLVAAELL
LKDKANESDLPLVPPRRGATLYMVPQGIRPVVQLTAIEILAWGLRNMKTYQLATVTSPSL
MVECGGEVVQTAIIKNIKKNPNFPGSVLFFKVLLPKEEIYTPPIVLKVIDHRPFGRKPIV
GQCTLSLEEFRCDPYVTNAEVAMSSKVAMMAATQGDIIINMEDRPILNTELHKEKEEEAV
DWWSKFYASVGEHEKCGPYLKKGYDTLKVYEGELEEVPDFRGLTDFCKTFRLQRGKTEDE
DDDPSVVGEFKGSFRVYPLSDDPGVPAPPRQFRELPESGLQECLVRIYVVRCMDLQPKDN
NGMCDPYIKISLGKKTKDDRDDYTPNTLNPEFGRMFEMSCFLPQDKDLKIAVYDYDLLSR
DEKVGETVIDLENRLLSRFGAYCGLPQSYCISGTNQWRDQLKPSQILENLARLRGIPSPR
TSADGSMLSFGGKDYSLLDFEANRVIHQHLGPARERMALHVLSKQGLVPEHVETRTLYST
YQPTLSQGKIQMWVDIFPKSLGLLGPPCHITPRQAKKYFMRAIVWNTTDVILDETSITGE
NMSDIYVKGWMPGMEQDKQKTDVHYRSLDGDGNFNWRFVFGFDYLPAEQLCLVSRKEHFW
NLDQTEFRTPPKLIVQIWDNDKFSLDDYLGTVELDLLHLIPPAKTPEKCSLKMLPGVTGS
TPSKQPPPNSLFSQKSVRGWWPCMIEQDGKHILGGKVEMTLEIVEEREVEERPAAKGRDE
PNMNPKLDFPNRPDTSFFWFTSPCKTMRFIIWRRFKWIFIGLIVLLLVLLFLGILLYSLP
NYISMKIVKPFS
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtcgtagtggaatcagccaaaggcatccccaaaaagaaactcggacaccca
gatcccatagcagcggtagtgttcaaaggtgaaaagaagaaaactaaagcaattgatagt
gaactcaatcccgtgtggaatgaagtgcttgagttcgacctaaagggctccccattggat
gcctcctcctttttggacgtgattgtgaaagactatgagactattggcaaagacaaattt
attggctcagctaagatctctctcctagacctggcccatggtcacaccaagtccctccca
gcaaagaacctgtccctggtcaatgagaagaaacaggacactggggcgaccattaatttg
atgatagggtacgagccgccagctagcacaactccgaaccctaacaatcaaactgatgaa
gaccagtcgtatggggacacaggtgggggtgaggaaggggaggatagggaggaggtatcc
cttgggggtcaggtggggacccctggagttccacccacacctggccagcctggtaacccc
aaccagaggcctgtccggactagccgcaagagacaccgggccctggccaacaagccacag
gacttccagattcgtgttcgagttatcgagggccgacagttgccgggaaacaacatcaaa
ccggttgtcaaagtgaatgtgtgcggacagacccacagaaccaggatcaggcgaggaaac
aaccccttctttgatgagatgttcttcttcaatgtcaacatcctgccttcagagctttta
gatgactgtatcagtattcgggtttatgattcctactccctcagagcagacagtctaatg
ggggagttcaagttggatgttgggtacatatatgacgaaccagcccacgccataatgagg
aagtggcttctcctgagtgaccctgatgactctagctcgggggccaaaggttacctgaag
gtcagcctggtcatcgtggggacaggagacgagccaccgactgagaagagagagcggaac
gaggagcaagatgacatagagagtaatctgttggtgcctgctggggtaacactcagattg
gtcactctcaacctgaaggtgtaccgtgctgaggacatgcctcagatggatgatgcgttt
gtacagactgtgaaacaagtatttggaggggaaggcgataagaaaaacttagttgatcca
tttctggaggtcagcttcgctggcaagaagttgtgcaccaaaattatcgagaaaaatgcc
aatcctgagtggaaccagctgatcaaccttcaggtcaagttcccatccatgtgtgaaagc
atcaagttgactgtatttgactgggatcgtctgaccaggaatgatgtgataggaaccaca
tttctaaatctgaccaaaatagcctcatctggtggtgagattgaagatacgcctgcagaa
aattgcaccaatctgtcatctgaagtgagcagtggggaggcggaggtgggtttcctccca
gcgtttgggccttgctacctaaacctgtacggcagtcccagggagttcactggcctccca
gacccgtacgaggaactcaactttggcaagggtgaaggggtggcctacaggggcagagtc
ctcatcgagctctccactcagctggagggcaaagctgacaggaagctggataacatctcc
agtgatgacatcctggtggcccagaagtaccagcggaggaggaagttctcgctgtgtgct
gtgttccacagctcctgcatgctccaggagcccggtgagccaatccagttcgaggtcagc
atcggtaactacggcaacaagctggactccacctgcatgccgctgtcatccacaacccaa
tacagctgtgctgtgtttgacggtaaccactactattacctgccctgggctgacaccaaa
cctgttgtcatcctcacatccttctgggaagacattagccaccgattggattcagtcaac
atcatcctctacatcgcagacagactggaatccaacctcacttctttgagaacagccatc
cttgccaaagcctcagaggtgcgcttggctgagatctggctcaaactcatcaaccacatg
attgaggatctgagcaactttcaggtaccagatcttgagggcaggcccaacctgacggct
ctggacgtccagattaagaagctgcgtgattcggcggtggccatcatcagagagatggcc
aaacgcttgaaggaggaggccaccgacgttatagccactctgacagacatcgaggactgg
ctggagagactgaaacagcttgcagaggagccccagaacagtatgcctgacgtggtgatc
tggatgctgcgtggagagaggagggtggcgtatgcccgtctcccagccaatcagatcctc
tactccacctacagtgagcaggcctgtgggaaatactgtggcaggacccagaccatcttc
atgcagtaccccatggacaaaaacaaaggtgtgaagatccctgtccagctccgtgtcaac
atgtggctggggctctctgcccacgagaagaagttcaacagcttctcagagggaaccttc
agtgtgttcgcagaaatgtatgagaaccaggcccaggtgtttgggaagtggggcaccaca
gggttggtgtgccggcataagttctctgacgtgacggggaaggtgaagctgaaacaggag
cgcttcatgccccccagggcgtgggagtgggaaggcgagtggttcgtcgaccccgagaga
ggcctgctaacggaagcagacgcggggcacacagagttcacagacgaggtcttccagaac
gagacgcgtttcattggcggggagtggaagcctgctgccgaccccttcacagacgtgaat
gggcagaagagccagagtccaggggagatagagtgtcctgctggctggaagtgggaggat
gactggagcttcgacagcaacagggctgtggatgagaaaggttgggagtatggcgtcacc
attccccccgatgacaagcccaagtcctggggtgcagcagagaagatgtaccacatccac
cgcaggaagagactcttacgaccacgcaggaaaatagcagacactaaagcagcacctgag
aggcgggatcccggcgaaggctgggaatactcgtccttgattggctggaagttccacagg
aaggagcgttcgtctgacacattccgccgtcgccgctggagacgcaagatggctccgtca
gatgggataggagcttcagccatcttcaggttggagggggcgctgggggtagatgttgat
gagaaggccagtaaaaaggacgcagccagactgtttggtgccaacacacccaccgtttcc
tgtaattttgaccggtcgtatatgtaccatctgagggtgtatgtctatcaggccaggaat
ctcatcgccatggacagggacagcttctcagatccctatgcccatgtgtccttcctccat
gtgagtaagaccacggaggtcatcagggccactctgaaccccacctgggaccagaccctc
atctttaatgacatcgagatctatggagacccccagaccattgcactcaacccccccaac
gtggtgctggagctctacgacagtgaccaggtgggtaaagacgaggccatgggtcgctgt
acgtgcccccctgtggtgaagctgaacctcggcacagtggtctcccccaaactgctgtgg
ttccccgtcaccaagaaaggccgcagcgcaggagagatgctggtggctgctgagctattg
ctgaaagacaaggccaatgagagtgacttgcccctggtgccccccagacgaggagcaaca
ctctacatggttccccagggaatcaggcctgtcgtacagcttaccgccatcgagatctta
gcctggggtctgaggaacatgaagacctaccagttggccacagtcacctctcccagtctc
atggtggagtgtgggggggaggtcgtccagacggccatcatcaagaacatcaagaagaac
cccaacttccctggatctgtcctcttctttaaagtgctcctacccaaagaggagatatac
acccctcccatcgttctgaaggtgatcgaccaccggccctttggtaggaagcccattgtg
ggccagtgtaccctctccctggaggagttccgctgtgacccttacgtcaccaatgctgag
gtggccatgtcttccaaagtggccatgatggcagcaactcaaggagacatcatcattaac
atggaggataggcccatccttaatactgagctccacaaagagaaggaggaggaggcagtt
gactggtggagtaagttctatgcctctgtgggagagcacgagaagtgtgggccgtacctc
aaaaaaggatacgacaccctaaaggtgtatgaaggggagctggaggaggtcccagatttc
cgagggctgacagatttctgtaaaacgttccgactgcagcgggggaagactgaggatgag
gacgacgacccctcagtggtcggagagttcaagggctcgttccgggtgtaccccctatct
gatgacccaggggtgccagccccaccacgccagttcagagagctgcctgagagtgggttg
caggagtgcctggtcaggatctacgtggtgcgatgcatggacctgcagcctaaagacaac
aacggcatgtgtgacccttacatcaagatctctttagggaagaaaacaaaagatgacagg
gatgactacacaccaaacaccctcaatccagagtttggcaggatgtttgagatgtcctgt
ttcctccctcaagacaaagacctgaagatagccgtgtacgactatgacttgctcagccga
gatgagaaagtgggagagacggtcattgacctggagaacagactcctctcccgcttcggc
gcctactgcggcctgccgcagtcctactgcatctcagggaccaaccagtggagggatcag
ctgaagccttcccagatcctggagaacctggccagactgagagggatcccttcaccccgc
acctctgctgacggcagcatgctctccttcggggggaaagactacagcctgctggacttt
gaggccaacagagtcatccaccagcacctgggtccagccagggagaggatggccctgcat
gtcctcagtaaacagggtctggtgccagagcatgtggaaaccaggactctctacagtact
taccaacctacactgtcccagggaaagattcagatgtgggtggacatcttccccaagagc
ctgggtttactgggacctccctgccacattactccacgccaagccaagaagtacttcatg
cgggctatcgtctggaacaccactgatgtcatactagatgagaccagcatcaccggagag
aatatgagtgacatttacgtcaaaggatggatgcctggtatggaacaggacaagcagaag
acagacgtccattacagatccctggatggtgacggcaacttcaattggcgattcgtcttt
ggctttgactacctgcctgcagagcaactgtgtctcgtttccaggaaagagcatttttgg
aatctggaccaaaccgagtttcggacccccccaaagttgatcgtccagatttgggacaat
gacaaattctcactggatgactacctgggcacagttgagctggatctgcttcatctgata
ccccctgccaagacccctgagaaatgcagtctgaaaatgttaccaggggttacaggctcc
acaccttccaaacaaccaccgcccaactctctgttctcccagaagtctgtgcggggctgg
tggccctgtatgatcgagcaggacgggaagcacatcctgggtgggaaagtggagatgacc
ctggaaatagtggaagagagggaggtagaagagaggcctgctgcgaagggccgggacgaa
cccaacatgaaccccaaactagactttcccaatcgccccgacacttccttcttctggttc
accagtccatgcaagaccatgaggttcatcatatggcgcagattcaaatggatcttcatt
ggtttgatagtcctcctgcttgtgctcttgttccttgggatcctgctgtactccctacca
aactacatctcaatgaaaattgtgaagcctttctcttag
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integrated database retrieval system
