Oncorhynchus tshawytscha (Chinook salmon): 112226114
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Entry
112226114 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 27 isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226114
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112226114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
Glyco_hyd_101C
SH3_1
PH
PH_9
SH3_9
Motif
Other DBs
NCBI-GeneID:
112226114
NCBI-ProteinID:
XP_024246125
LinkDB
All DBs
Position
LG27:13133364..13162043
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AA seq
1087 aa
AA seq
DB search
MSSLVCNMGLVLVEFEYEYTGRDGGLVSIKPNERYILLAKTNDHWWHVRKNEQARPFYIP
AKYVKELPAEFPSPLDFADPPSPDLVPVPGPVPVPVPVPKHYVPDRAEMRAGDEVTIRLR
SPKRHQKTENRMSTFGVPLEFHDPSPGVLKRGGLNDSMPGLHSYVALEVPLTVPSPQANN
SAKHKKQLSLSSGVLFGSSLSVEEPLSLNPRAPSFSPADPLHRPSQAIPVERPLIPDAEV
TGGGIPHQEPLKEPECPLELEEGENEKSSVEPEDESKEDSENIYESILDLKLDESPILVE
KAPTVSPAAVAEPTPVVAPTSPSPTQTQVENASPNTAVYANVTELKKNIPQSPPLVALSP
DLPLTQEGWQVHTDKDSGKEFYYRPATGQTTWADPRSTLPSTDMELPKEALSVPALSMAL
SPGLSPALSPGLSMALSPALSPGLSPALSPALSPASSQGSNWEQVLDETTGRNYFYNPTS
GATSWGAPEPIAPSSPVTEPPVLKLPNRGPPPLPKEDYLTEDHEAPDTSSSVFPKDLLPI
PQAKQAVIPRAILDSVPAGWKRSMEADGKTVFTSERTQEQWLKSVDQEGKTYYYLRDGSR
SQWNLPAELPVASSLPKVRNGVDQDSLPVLKNWRHTMGPAQFGPSQEDNRFFPTHRRNVS
DVTSEASSSGNSPETPHHTDRLGARSRLSHLSTDSHHEHTHLLEKAGILNKTKVADNGKR
IRKNWSPSWTVLHGGILTFHKDPKSAPSGNSNKTNQITPEYTVELRGATVGWAPKDKSSK
KNVLELKTRHGCEYLVQYDTESIICDWHRIILDTVRQLDQDHLSEEEEEEPMEKSPLASD
RDKRTSSATKITPGISAESSDQGRVRTKLRKLLQKRPTLQSVKEKGYIRDNVFGCHLDTL
CHRENSTVPRFVEKCIRAVEIRGLDIDGIYRVSGNLAVIQRLRHKADHEENLDLEDGQWE
EIHVITGALKLFLRELPEPLFPYSFFDKFIAAIKIQDYPQKVSYFRDLVRSLPLPNHDTM
HLLFKHLLKVIEFGEKNRMSVQSVAIVFGPTLLRPQTESANITVYMVFQNQIVELILKEF
ETVFAPS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgtgcaacatggggctggtgctggtagagtttgagtacgagtacacg
ggccgcgacgggggcctggtgtccatcaagcccaacgaacgatacatcctgctggccaag
accaacgaccactggtggcacgtgaggaagaacgagcaagcaaggcccttctatatacct
gctaaatacgtcaaggagctccccgcagagttcccatccccactggactttgctgaccca
cccagtcccgatttggtcccggttcctgggccggtgccagtgcctgtcccagtcccaaag
cactacgtaccagaccgggcagaaatgagggctggagatgaggtgactatccgcctccgc
tccccgaagagacaccagaagactgagaaccgcatgtccacatttggcgtacccttagaa
ttccacgacccgtctcccggggtattgaagcgcggcgggctgaacgactcgatgccgggc
cttcactcctacgttgcccttgaggttccattaacagtgccctcgcctcaagccaacaat
agtgccaaacacaagaagcaattaagcctgagttccggtgtgctctttggctcctccctg
tcggtggaggagcctctctccctgaacccccgagcccccagcttcagcccagctgacccc
ctccaccgaccctcccaggccatcccagtggagaggcccctcattcctgatgccgaggtc
accggtggcgggattccccatcaggaacctctgaaagagccggaatgtcctctggagctg
gaggagggagaaaatgagaaatctagtgtggagcctgaggacgaatccaaggaggactct
gaaaatatttatgaatccatattggacctgaagctggatgagtcccctatattagtggag
aaggccccgacagtgagtcctgctgctgtggctgaacctacacctgttgtcgctcccact
tctccatctccaacacagacacaggtggaaaatgccagccccaacactgctgtttacgcc
aacgtcaccgagctgaagaaaaacatcccacaatccccgccgttagtagctctgagtcct
gacttgccccttacccaggagggatggcaggtgcacactgacaaggacagtgggaaagag
ttctattaccgcccagcaacgggccaaaccacttgggccgacccccgcagcaccctcccc
tccacagacatggagctgcccaaggaggcgttgtctgtcccggccctgtccatggccctt
tccccgggcctgtccccggccctgtccccgggcctgtccatggccctgtccccggccctg
tccccaggcctgtccccggccctgtccccggccctgtccccagcctcatcccagggttcc
aactgggaacaggtgttggatgagaccaccggtcgaaactacttctataaccccacctct
ggggccacatcctggggagctccggagcccatcgccccctcctctcctgttactgagcct
cctgtgctgaagctcccaaacagaggaccgccccctctcccaaaggaagactacctgaca
gaagaccacgaggctccagacacttcctcctcggtgttccccaaagacctcctaccaatt
ccgcaggctaaacaggccgtcataccccgggccattctagacagtgtcccggcgggctgg
aagcgctccatggaggcagatgggaagaccgtattcaccagcgaacgcacacaggagcag
tggctcaagtctgtggatcaagaaggaaagacgtactactacctgagagacggctccaga
tcccagtggaaccttccagcagagctcccagttgcatccagtctgcccaaggtgaggaat
ggagtggaccaggacagtctgccggttctgaagaactggagacacaccatgggcccagct
cagtttggcccctcccaagaagacaacaggttctttccaacacataggagaaacgtttcg
gacgtcaccagtgaagcatccagctcaggcaactcccctgagacgccacaccatactgat
aggttgggagcacggagtagactgtcacatctgagcacagactcacatcatgagcacaca
catctactggagaaggcagggatcctgaacaaaaccaaggtggccgacaatgggaaaaga
attaggaagaattggagtccgtcatggacagtgctgcatggaggcattctcacgtttcac
aaagaccctaaatctgcaccctcgggaaactcaaacaagaccaatcagatcaccccggag
tacacagtggagctgcggggagccactgtgggctgggcccccaaggacaagtccagcaag
aagaacgttctggagttgaaaacacgtcatgggtgtgagtacctggtccagtatgacaca
gagagcatcatttgtgactggcacaggatcatactggacacggtcagacagctggaccaa
gatcacttgtcggaagaggaagaggaggagcctatggagaaatctccacttgcttcagac
agagacaagaggaccagctcagccaccaaaattacgccaggcatcagtgccgagtcatca
gatcaggggcgtgtccgcaccaaactacgcaagttactccagaagaggcccacactgcag
tcagtgaaggagaagggctacataagagataatgtgtttggttgtcatctggacacgctg
tgccatcgagagaacagcactgtgcccaggtttgtggagaagtgcatcagggcagtggag
attagaggtctggacattgatgggatctacagagttagtgggaatctagctgtcattcag
agactacgccacaaagcagatcatgaggaaaatctggacctagaggatggtcagtgggag
gagatccatgtgatcacgggggcgctaaagctcttcctgagggagctgcctgaacctctc
ttcccttacagcttcttcgacaagtttatcgctgccatcaaaatacaggactatcctcag
aaggtgtcatacttccgtgacctggtgaggtcccttcccctgcccaaccacgataccatg
cacctccttttcaaacatctcctcaaagtgattgagtttggggaaaagaaccgtatgtca
gtccagagtgtggccatcgtgtttggccctacgttactcaggccccagactgagtcggcc
aacatcaccgtttacatggtcttccagaatcagattgtggagctcatcctcaaagagttt
gagacagtatttgcccccagctga
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