Oncorhynchus tshawytscha (Chinook salmon): 112226132
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Entry
112226132 CDS
T05605
Name
(RefSeq) MICAL-like protein 1 isoform X1
KO
K19948
MICAL-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226132
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112226132
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112226132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bMERB_dom
CH
LIM
CAMSAP_CH
CH_2
Motif
Other DBs
NCBI-GeneID:
112226132
NCBI-ProteinID:
XP_024246185
LinkDB
All DBs
Position
LG27:14228885..14235805
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AA seq
988 aa
AA seq
DB search
MGTLKALQEWCRIKCENYPNVEIRNMSSSFRDGLAFCAIIHKHRPDLIDFNSLSKDNVYE
NNHLAFEVAQSKLGIPALLDAKDMVSTEVPDRLSVITYLSHYHHCFNKKSHAGPASLKTP
YVAECSSHSQTQPDSLGGLQPAKSRTEEPSNSGRPCSVCASCMKHVHLVQRHLTEGKLYH
RSCFRCSVCSSTLLPGSYKEGSAVGSLVCTHHLTASQNAHPDYSKQTGSIENLPKFDEQE
VTLSQGGLTDNPDLSDFIGKTDSDETVIFGRGGTETEGGERKTRHNTLKKPMPPRPPKPT
VEEGKLEEAGTRPIQTTKTLIVTPDSDSASASPGRPVPAPRRVLDSTPPRPAPRTRPPKT
MDSPLVSSYPVDNKTLPNPSRRFGQPSGPRKPKDPPWLELVQPGPWPKLPPAPPPSMPKP
PRSGSIPSLGGSWYRAREPPPNPFGEFEDEEADDDYTGQENTMSGAEGQAQPSMVTSQTW
CGTSQLAEAASSYCHAHLEDTSREVDKSSIAGADDPVNLPEIANAPEKESLAEAGCSLPV
SNLAEEPCSIGISESADVGGIANMAETAGALDVCNLADVGVGESTNLSKAASSLGLSNLT
EAKTTSSSYLAEAASSLDISNLAEVASSHGVSALAGASGFGGLVGAVSAPNISNLTEEAS
SYGVSEASAGSLSVSNLAGADSICSVTGAPKALGKSDIAQSLSLPKSVSVPAISTSLTCT
QSHPPPTLSTNGAAASPSLLRPPSLPSVSEVRDSGQVPTPSHSKQVCKENPFNRKVSPSE
FPKSKPAPGHGFPLIKRKVQTDNYAPVEELQGELGELEKRMERLELRGVEMERSLRDCQN
DQEEEDMLVDWFTLIHEKHMLVRRDAELVYMAKQQNLEERQADVEYELRCLLNKPECKWS
KDDRYRDQQLMEELVTIIEQRNHIINSLDQDRQREEEEDALFSMIKKKDLRKESGKDLKT
LRAKFKPMKMLKMLSHKDSKSKGSLKKN
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggggacattgaaagctttacaagaatggtgtcgcataaaatgcgaaaattaccccaat
gtggagataaggaacatgtcttcttcattcagagatggattggcgttttgtgctattatc
cataaacaccgacctgatttgatagacttcaactccctctccaaagataacgtttatgaa
aacaaccatctggcatttgaggttgcacagtcaaagctgggaatccctgcattgctggat
gctaaggacatggtgtccacagaggtgccagaccggctaagtgtcatcacttacctctcc
cattaccaccactgcttcaacaagaagtctcatgccggtccagccagtttgaagacgcca
tatgtcgcagagtgctccagtcactcccagacacaacctgactctcttggaggtttgcag
cctgccaagtcaaggacagaggagccatccaacagtggcaggccatgtagcgtttgtgcc
tcctgcatgaagcacgtccacctggtgcagagacatctcactgaggggaaactctaccac
cgcagctgcttcagatgcagtgtgtgcagcagcactctcttaccagggtcttacaaagag
gggagtgcagttggctccttggtctgcacccaccacttgacagccagtcaaaatgcccac
cccgactacagtaaacaaactggatcaatagagaatctgcccaaatttgatgagcaggag
gtgacactatctcagggtggattaacagacaaccctgatctctctgattttattggaaaa
acagactcagatgagacagttatttttggaagaggagggacagagacggagggaggtgag
agaaagacaaggcacaacacactcaagaagccaatgccaccccgtcctccaaagcccact
gtagaagagggaaagcttgaagaagcagggacacggcccattcaaacaaccaaaacactc
attgtaacaccagacagcgattcggcttctgcaagccctggacggccagttcctgcaccc
aggcgggtgttagactccacccctcctcgtcctgcacctagaacccgtccacctaaaacc
atggacagcccccttgtttctagttacccagttgataataaaaccttacccaatccttct
cgcaggtttggccaacccagtgggccccgtaaacccaaagacccaccgtggctggagctt
gtccagccagggccctggccaaagcttccccctgccccgccccctagtatgcccaagccc
ccacgctcaggctctataccctccctcggagggagttggtacagagcgagagaaccccct
cccaacccctttggggagtttgaggatgaggaggctgatgatgattacactgggcaagag
aacacaatgagtggtgctgaaggccaagcacagccctcaatggtaaccagccagacatgg
tgtggtaccagtcagttagctgaagcagccagctcatactgccatgctcatttagaggac
acatccagagaagttgacaagtcaagtattgctggagcggatgacccagtaaatttacct
gaaattgctaatgcaccagagaaagaaagtttagctgaagcaggatgctcacttcctgtg
tctaatttagctgaagaaccttgttcaattggtatatctgagtcagctgatgttggtggg
atagctaacatggctgaaacagctggcgcacttgatgtatgtaatttagcagatgttgga
gttggagaatcaaccaacttgtccaaagcagctagttcacttggtttgtctaatttgact
gaagctaaaaccacaagttcatcttacttggctgaggctgctagttcccttgatatatct
aatctagctgaagtagccagctcacacggtgtatctgctctagctggagctagtgggttc
ggaggtttagttggagctgttagtgcacctaacatatctaatttaactgaagaagctagt
tcatatggtgtttctgaagcttctgccggttcacttagtgtgtctaatttagctggagct
gatagcatatgcagtgtaactggagcaccaaaggctcttggcaaatcagatatagcccag
agcctctctttgcccaaaagtgtgtctgtgcccgcaatctccactagtttaacctgtact
caaagtcaccccccaccaaccttgtcaaccaatggagcagcagccagtccctccctgctc
agacccccatcgctccctagtgtgtctgaagtgagggactctggccaggtgcccaccccc
tctcacagtaagcaggtgtgcaaggagaaccctttcaatcgtaaagtctccccctctgag
ttccccaaatccaagcctgccccaggacatggcttccccctcatcaagaggaaggtgcag
acagacaactatgccccagtggaggagctgcagggggagctgggggagctggagaaacga
atggaaaggctggagctgagaggggtggagatggagagaagcttgagagactgccagaat
gaccaggaagaggaggacatgttggtggactggttcactctaatacatgagaaacacatg
cttgtgcgcagggacgcagagctggtatacatggccaagcaacagaatttagaggagaga
caggcagacgtggaatatgaactgagatgtctcctcaacaaaccagagtgtaagtggagt
aaggatgaccgttatagggaccagcagttgatggaggagcttgtcaccatcattgaacaa
aggaaccatatcatcaacagcttggatcaggacaggcaaagggaagaagaagaagatgct
ctgttttccatgatcaagaagaaagatttaagaaaagagtctgggaaagacctgaagacg
ttaagagcaaagttcaagcccatgaagatgctgaagatgctgagtcataaagattctaag
agcaaaggctctctaaagaagaactga
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