Oncorhynchus tshawytscha (Chinook salmon): 112226138
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Entry
112226138 CDS
T05605
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112226138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226138
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
GGA
112226138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
ImmE5
Mac
Hrs_helical
YgaB
PCRF
Elf4
YkyA
Motif
Other DBs
NCBI-GeneID:
112226138
NCBI-ProteinID:
XP_024246191
LinkDB
All DBs
Position
LG27:complement(14222620..14228879)
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AA seq
690 aa
AA seq
DB search
MRQCQLPSCPSSTHHCRGGEKGCSQSCPSRDTFMVKRIPVVMAAPPDTGSLEARINKATN
PLNRETDWDSIQAFCDQLNNDLEGPQLATRLLAHKIQSPQEWEAMQTLVVLETCMKSCGE
RFHSEVGKFRFLNELIKVVSPKYLGTRAPEPVKKKVLELIYSWTLGLPDEAKIADAYQML
KKQGIVKQDPVLPADKLLLLPTPRPKNAIFEDEEKSKTLTRLLNSTHPEDLKAANKLIQE
MVQEDQKRAEKLSKRVNAIQDVNESVSLLTQLLEDYDRTTNPQSNAELIQDLYQRCEKMR
PTLFRLASDTEDNDEALAEILQANDSLTQVINLYRQQVKGEVVNGNNSANTRRLTGSSVA
LLDLSGLDTSPPSYPEFPTPTDSLNAPSQEMGISLLDDELMSLGLSEGTHTSNPASQPED
STAWDSFQSSDSVDITDIPAAPSVILSPDRLPYTQPLSTGATSGSSALDELDLLGKKLLQ
QSLPPEGLQVKWDKPLFKPTLRDLQNKSGTNPSPIPAFSPEHPVALQGDRLLDTSPVHTV
IPPIEMTLNDVFVPLESIKPSSLLPVTVFDSHSLRVLFHFARDTPPSLADVLVVIISMLS
SAPVPVSNILFQPSVPDTMRVKLQPPSGTELPAFNPILPPAAITQVLLLANPHKEKVQLQ
YKLTFMLGEEDHDERGVVAQFPPSDTWGNL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtgccagctgccatcgtgtccatcatctacccatcactgtcggggaggtgag
aaagggtgctctcaaagttgtccctcgcgagacactttcatggtaaagagaattccggta
gtgatggcggcgccgcctgacacgggcagtttggaggcacgtatcaacaaggccacaaac
ccactgaacagagagacagattgggacagcatccaggccttctgtgaccagctcaacaat
gatttggagggaccccagctggccaccaggctactggctcacaagatccaatcacctcag
gagtgggaggccatgcagacactcgtggtgctggagacttgcatgaagagctgtggggaa
aggttccacagtgaggtgggcaagtttcgcttcctcaacgagctcatcaaagtggtctct
ccaaagtacctcggcacccgggctccagagccagtgaagaagaaggtgttggagctcatc
tatagttggacactggggctgcctgacgaggcaaagatcgctgatgcctaccagatgctt
aaaaaacagggcattgtcaaacaggacccagttcttccagctgacaaactcctcctgctt
ccaactcccagaccaaaaaatgccatatttgaggatgaggagaagtcaaagacactgact
cgcctgttgaacagcactcaccctgaggacctgaaagcagccaacaaactgatccaggaa
atggtgcaggaggaccagaagcgggcggagaagttgtccaagcgtgtgaacgccatccag
gatgtgaatgagagtgtcagcctactgactcagctgctggaggactatgaccggaccacc
aacccacagagcaatgcagagctcatccaggacttgtaccagcgctgtgagaagatgaga
cccacattgttcagactggccagtgatacagaggacaatgatgaggctctggcggagatc
ctccaggccaacgacagcctgactcaggtcatcaacctgtacaggcagcaggtgaaggga
gaggtggtgaacggtaacaactcagctaatacgcgaaggctcacaggaagtagtgtggcg
ctacttgatctatcgggattggacacgtcacctccttcctacccagaattccccactcca
acagacagcctaaatgctccctctcaggagatgggcatcagtcttcttgacgatgagcta
atgtcactgggtttgagtgaggggacccacacctccaaccctgcctcccagcctgaggac
tctaccgcctgggactctttccagtcttccgacagtgtggatattactgatatcccagca
gcgcctagtgtaatactgagtccagatcggctcccctacacccagcctctttctactgga
gccacgtctggaagctcagccttagatgagttggatctgctggggaagaagctgctacag
cagtccctacctccagagggcctgcaggtcaaatgggacaagcctctgttcaaacctact
ctacgagatctccaaaacaaatctggaactaatccaagtcctatcccggccttctcccct
gagcacccggtggctctccaaggtgataggttgttggacacctctccggttcacacagtc
attccccctatagaaatgaccctgaacgatgtttttgtgccacttgagtccattaagccc
agcagcctgttgcctgtgacggtgtttgatagccacagtttgcgggtgctcttccacttt
gcacgtgacactccgccttctcttgctgatgtgctggtggtgatcatctccatgctctcc
tccgccccggttccagtcagcaacatcctctttcagccctctgtccctgacacaatgaga
gtgaagctacagcccccatcaggaacagagcttccagccttcaacccaatcctcccacct
gctgccatcacacaggtcctgctgctggccaaccctcacaaggagaaggtgcagttgcaa
tacaagctaaccttcatgttaggagaggaagaccatgatgaaagaggagttgtagcacag
tttccaccttcagacacatggggcaatctttaa
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