Oncorhynchus tshawytscha (Chinook salmon): 112226149
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Entry
112226149 CDS
T05605
Name
(RefSeq) protein Tob2
KO
K14443
protein Tob/BTG
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112226149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112226149
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112226149
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112226149
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Ribosomal_L9_N
Motif
Other DBs
NCBI-GeneID:
112226149
NCBI-ProteinID:
XP_024246209
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Position
LG27:complement(13979599..13986669)
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AA seq
406 aa
AA seq
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MQLEVKVALNFIVSYLYNKLPRRRADLFGEELEQILLSRYEGHWYPEAPLRGSAFRCLHL
GAPSDPVVELAARRSGLDTEEVRANVPPELSVWIDPYEVSYQIGEKGAVKVLYLEDPSGL
GGEGEMVEVVSGVSKGDLEVEEAKSLGFNPDAQVFVPIGAQISPVLLPSLSSTPTPLSAS
SCPGIFSYPSSSTPTNPTAHSSNTSTPSPPSGGLPYPPSQQPTAALPSTRPPLQPITFTT
ASFAATKFGSTKMKKCGGSGSAGGSGVGVPPPQRMLARSPTNISPPGLLKHKPLSVSLQS
LGAQIPSQLSPNAKEFVYPASPGPLYFDNDAPLILSHSSPFQHPHPTHSHPSFDPFSNPQ
PGPAVGAIGGSSGGISYMEKPSFVEGIGGYNLQYPSQAFQPVVLAN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcagctagaggtaaaggtagctctgaatttcattgtgtcctacctgtacaacaaactg
ccccgtcgtcgtgctgacctcttcggggaggagttggagcagatactgttgtcgcgctat
gaaggccactggtaccctgaagctcctctgcggggctctgccttccgctgcttgcaccta
ggggcccctagtgacccagtggtggagctagctgccaggagaagtggactggacacagag
gaagtgcgtgccaatgtcccccctgagttgagtgtgtggatcgacccctatgaagtgtcc
taccaaatcggggagaagggagccgttaaggtcctgtacttggaggatccatccggctta
ggtggagaaggcgaaatggtggaagtagttagtggagtgagtaaaggggacttggaggta
gaggaggccaagagcttagggttcaaccctgatgcccaggtgtttgttccaattggagcc
cagatatctccagttctgcttccttccctctccagcacacccacacccctctcggcctca
tcctgcccagggattttcagctatcccagctccagcacacccacgaacccaactgcccac
tcctctaacacatccacaccttcccctccaagtgggggactcccttaccccccctctcag
cagccaacggctgccctgcccagcacccgtccaccgctgcagcccatcaccttcaccacg
gccagtttcgccgcaaccaaatttggctccaccaagatgaagaagtgtggcggttccgga
tcggctggcggctcgggtgtaggcgtgcccccgccacagaggatgctcgcccgttccccc
accaacatctctcccccagggctgcttaaacacaagcccctctcagtctccctgcaatcc
ctgggggctcagatccccagccagctctcccccaatgccaaagagtttgtttacccggca
tccccagggcccctatactttgacaacgatgctccgctcatactttcacactcaagcccc
ttccagcaccctcaccccacccactcccacccctcatttgacccattctccaacccccaa
cctggtccagctgttggtgccattggtggtagcagcggtgggatttcttacatggagaag
ccctcatttgtggaaggtataggggggtataacctgcaatatcccagccaggccttccag
ccggtggtgctggccaactaa
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