Oncorhynchus tshawytscha (Chinook salmon): 112226171
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Entry
112226171 CDS
T05605
Name
(RefSeq) sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112226171
04131 Membrane trafficking [BR:
otw04131
]
112226171
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
112226171
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112226171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
DUF1757
Motif
Other DBs
NCBI-GeneID:
112226171
NCBI-ProteinID:
XP_042163135
LinkDB
All DBs
Position
LG27:14366852..14382675
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AA seq
1086 aa
AA seq
DB search
MDSNVSGEYISTMENMDPTLSELGDEFTLGDIDEMLQFVSNQVGDFPDLFEDQMQAIQPQ
MQAIQPQQQPTIQVHSQSIPMQAHSFPVHTLVQTQNQALPIQSQAQTVMITSSGSQSRFI
QNPVICHQSPTTSFQVLQPQMQSIMTSPQVQPMTIQHQRLLQTGQTIQTLSTAPTVHTMQ
QQVQQVPLLVHQPQILKTENLVLTTLKPDGTQVLSTMQNPGITTLTHPIQTQTLQVPTLM
GSNILTTVPVMMGGGDKLPIKQLSSGTSHCVGGNRQVMDHGMVMGPGGVMKEGERRTTHN
IIEKRYRSSINDKILELRDLVMGGDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENLALKM
NSKNKSVVLSDDVEMKPEMLMMSPPASESGSGSPREFSPYCIDSEPGSPLLDHEQVKSEP
GSPSSVGVMDRSRLLLCALTFFCLSLNPLPSLLGSEAQSSSGLTSAHRASRTLFSLPSQT
HNFATWLWCLLPWLTVWMLSGVGAVWGCVRVLYLWEPVTPLHSPKSVSFWRQRKQADLHL
NRGDYTAAMASLKTCLSVLTRALPTTSWDLLFSLSWNLIRYCLHHPTPLGWLVRQVGGKH
KGEESKTSSRDAALVYHRLSQLQLTGKLPQRSGLWALSLSMSAVNLSESAQSKMAPAQQA
QIYVTAATALRTVLGHHLSCLPGYLLSCAEGVASQSDSKPIPDCLHWLFTPLGRQFFLSC
DWSVKSESREGVYTSQRDPADPIAQLHRCFCEKLLERAVHSLIQPHTDREARKPKNDSGE
FSSALEFLHLLNSCTEESSSPPFAAPPNHTTVPVADPVSRWWALVLKAAAHWLQGDDVAV
RSLLAEAERMPRALHTLDHPLPKAVLLLCKAVQMSLSPLKGEGAVACLSYCDRASSYLRT
SISVPLSAQSGNGLNKGVELLVCDLLLTLRTSLWQRGSSSNGEPGPAPGSQLAGFQWDLS
SLRRLGQCYRQAQHKVFLHETTVRLMAGASPTRTHQLLEHSLRRRTNNPGYTTAEGDCVL
GERERAHAILLACRHLPLPLLTPPGHRARLLAEAKRTLERVGDRRSLQDCQQILLRLSGG
TTIAAS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaacgttagtggggagtacatctcgaccatggaaaatatggatccgactttg
tcagaactaggggacgaatttacgctgggagacatcgatgagatgctccagtttgtcagc
aaccaggtgggggacttccccgacctctttgaggaccaaatgcaggccatccagccccag
atgcaggccatccagccccagcagcaacccaccatccaggtccacagccagagcatcccc
atgcaggcgcatagcttccctgtgcacaccctggtccagacccagaaccaggctctgccc
atccagtcccaggcccagacggtgatgatcacatctagcggtagccagtcccgcttcatc
cagaaccctgtcatctgccaccagagtcccactacaagcttccaagtcctccaaccgcag
atgcagagcataatgacatcaccacaggttcaacccatgaccatccagcaccagagacta
ctgcagactggccagaccatccagactctctccaccgcaccaacagtccacaccatgcaa
cagcaggttcaacaggtaccccttctggtccaccagcctcagattctgaagacagagaat
ctggttctgaccaccctgaagcctgatgggacacaggttctgtccaccatgcagaaccct
gggatcaccaccttgacccatcctatccagacacagactctacaggtaccgactctgatg
ggcagtaacatcctgaccactgtgcctgtcatgatgggaggcggagacaagctgcccatc
aaacagctgtcgtcaggcacctcccactgtgtaggtgggaacaggcaggtgatggaccac
gggatggtgatgggtccagggggggtgatgaaggagggggagaggagaaccacccacaac
atcatcgagaagaggtaccgctcctccatcaatgacaagatcctggagctgagagacctg
gtcatgggcggcgacgccaagatgcacaagtcaggagtgctgaggaaagccatcgactac
atcaaatacctgcagcaggtcaaccacaaactacggcaggagaacctggccctcaagatg
aacagcaagaacaagtcagtggtgctgtctgatgatgtggagatgaaaccagagatgctg
atgatgtcacctccagcatcagagtctggttcaggatctcctcgtgagttctctccatac
tgcatcgactccgagcctggcagtcccttactggaccatgagcaggtgaagagtgagcct
ggctcaccctcttccgtgggtgtgatggatcgctctcgtctcctcctctgcgcactcacc
ttcttctgcctctccctcaaccccctgccctctctcctgggatctgaggcccagagcagc
tctggcttgacctctgcacacagagcctccaggacactgttctcattacccagccagacc
cacaactttgcgacctggctttggtgcctgttgccatggttgacggtgtggatgttgagc
ggtgttggggcagtgtggggctgtgttagggtcctctacctctgggagcctgtcaccccc
ctccactcgcccaaatctgtctccttctggaggcagcgtaaacaagcagatctacatctc
aacagaggtgactatacagcagctatggccagtttgaaaacctgcctgtcagtcttgacc
agagccctgcccaccaccagttgggacctcctcttctcactctcctggaacctgattcgc
tactgtctgcatcaccccacccctctgggctggctggttcgccaggttggtgggaagcac
aagggggaggagtccaagaccagctcccgggacgcagctctggtctaccataggctgagc
cagctgcagctcacagggaagcttccccagcgtagtggcctgtgggctctgtctctgtct
atgagtgccgtcaacctcagtgagagcgcccaaagcaagatggcccctgcccagcaggcc
cagatctatgtcaccgcggcaacagctctgcgcactgtactgggccaccacctctcctgc
ctgcctggttacctgttgagctgtgctgagggtgtggccagccaatcagactccaagccc
atccctgactgtctgcactggctctttaccccattgggcaggcagttcttcctcagctgt
gattggtctgtgaagtctgagagcagagagggcgtgtacacttcccagagagacccagct
gaccccatcgcccagctgcatcgttgtttctgtgagaagctgctggagagagctgtgcac
tccctcatccagccccacactgacagggaggcacgcaagcccaagaacgactcgggggag
ttctccagtgccttggagtttctccacctattgaacagctgcacagaggagtcctcttct
cctcccttcgcagccccacctaatcacaccactgtgccagtggcagacccagtgagtcgc
tggtgggcattggtcctaaaggctgctgcccattggctgcaaggagatgatgtcgctgtg
aggtcactgctggcagaggcagagcgcatgcccagagctctccataccctcgatcatccg
ttgcccaaggctgtgctgctgctgtgtaaggctgtgcagatgagcctgtctcctctgaag
ggagagggggcggtggcctgtctgtcttactgcgacagagccagcagctacctgcgcacc
agcatctctgttcccctgtccgcccagtctggaaacgggctcaacaagggggtggagctc
ctggtctgtgacctcttgctgaccctcaggaccagcctatggcaaagaggaagcagcagc
aatggggagccaggccccgcccctggctcccaattggctggattccagtgggacctgagt
tcattgcgaaggctgggccaatgctacagacaggcacaacacaaggtgttcctgcatgag
accacagtgaggctgatggctggagccagtcccacccgcacacaccagctactggagcac
agcctccgacgcaggaccaacaaccctgggtacaccacggcagagggtgactgtgttctg
ggtgagcgtgaaagggctcatgccatcctgctggcgtgccgccacctacccttacccctg
ctgaccccaccagggcaccgtgcccgcctgctggccgaggccaagcgcacccttgagcgt
gtgggcgaccgccgctccctacaggactgccagcagatcctgctccgcctcagcgggggc
accaccatcgcggcctcctga
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