Oncorhynchus tshawytscha (Chinook salmon): 112226281
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Entry
112226281 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: periplakin-like
KO
K10386
periplakin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112226281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112226281
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112226281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
ERM_helical
Spectrin
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
112226281
NCBI-ProteinID:
XP_042172604
LinkDB
All DBs
Position
Unknown
AA seq
1757 aa
AA seq
DB search
MFKKKPGKSVTITQTKKAPSSELSALIEKLQKNADKVEKLILETEQNLNKDVSKINEGKQ
PLYQDDTNKRILSSLELLQGLDEDAVDAKHMYLQHPQAEMIEQDMKQLRVRLRKLREDHD
RIYHLTRSEGLPSVNWGRIIEEKQGNLSNKSFGQDLPTIENEVEEHNIFHSEVEALAPHI
SASDDKDSASALQLKYNKLLASSSARQRHLLSLRDYMQRCTNELYWMDQQAGERINYDWS
DTNLDYPARHRQYENFISKCLESKEATVTKLNDDGDKLIAANHPGKNVIEAHMEAVHADW
KEYLNLLICEENHLKHMDEYHKFHKEARDTQDLLKRMDKEVDQKYKPEFKDMYQMESLIR
DLDDQAKAMDHFDERVKALEKRSLQVLPLQFRRNTPQKLLPVEALCEFDTDEGQILRGER
YTLLSNKGPKWEVKDAAGRKLTAPGACFMVPPTDPESVAVSNSLAGQQKGIKMKVSGSKT
TLVKRLEELKKDGSAGSDKEEQQCRQLMAGLDKVTSDLDKQEKAIYSRVRPPLEQTRPLQ
DSADRLQDVKDIAAVVRKIEPEKSSKVREAEKFLTSNPKCASAPQLNGKVNEANNKYDKI
NLLLKCSEDKLQNSNRLENSLQNGKSLLSSYENKLAREEVAPADISSLEKTQRQLADIAS
ELKTKRSAVTETEANLRAAKGSCDTMATKLQEHCPDIDRQEGEVRRLNKRYDNLNRQIDT
RTQSLQRAKTSYSNYRSDYDNLNNWLSRVPNYEPTEKDNLSQVETKLENQKNLLSDIKKK
ESELNNVSKNAQLYQQAVKDYENDTEKFKSILDLEDGLVPQTYKRSRLESPALRVKEEES
AIEAKFTEVNAVNKQRMANLQFAQGLMNQQSDVIVSNNVQQVRSAAPGEEAWRIESQLKD
EIQRREQLEKDLEKIQTDIYMLEGQKPEDTVVKKEIIKKVPDPTLVDEVHNVRQKLSDET
RVTRAMDNELEALRLKLRGIETEIKEGAQQYTVKEVLRIERDRGQEEEVRRLREELEELR
RRKTIKDNEVIQITKQVTLLAQQKSKEQEVITEEEVIKVQNDPQLENEYRILLDRKQKEQ
EGRKQLEDELRFLQDKLRRLEKEKSMAEEKISIKEVLKVEKDIAFEREVENLRMQHEDEK
AKHRSSQRERADLQRKISSLEEEKSRVIVQEKVREIVRPDPKAEAEVANLRMELVEHQRR
YRDADQQLKSHQDELKMLRNRGPQIEIKEIIKEVIKYKTDPQTERELEKLRNEIVDKTYQ
TEKSEMEIRQLRDEIQRWKDTKPQVQIKEVVNEVLEYKENPKTKEEIEILKRKLADEQKK
RLDLERERSANEEKIRLRKIDLSQVREKVVQQEVVKMEEDPLLRSECSTFTQNINNEQRQ
RETLKEELFQLQRQKANLDAQLEELERERRARRDAELEIQRLRVRLNEMEVRDKENRERV
TVKQMVVLQQDPQQEKEHSILKLQVEEERHKRTLLEKELNVLLQQQVTLERMVVKEKVVR
TETIQVEKDPEAELEIEKMTRTLEQEKRRRLELDQELGSLKSRLSDMEFTNTKSSKELDY
IRDESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMESGKNLELRLDSLQRELA
ELRAITSQKDEEIEKLQKSLSAIQIKREQRESHLRRSIVVIDPDSGKEMRPEEAYKLGLI
DWKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGKKFSIEDALRAGNITNRQLQQYHD
KEITIQEFGVMVSGKTK
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaaacccgggaagagcgtgaccatcacgcaaacgaaaaaggcgccctcc
tctgagctgtctgcactgattgagaagctgcagaagaacgctgacaaggtggagaagctc
atccttgagacggagcagaacctcaacaaggatgtgagtaagatcaacgagggcaagcag
cctctgtaccaggacgacaccaacaagcgcatcctaagctctctggagctgctgcaaggc
ctggatgaggacgccgttgacgcaaaacatatgtacctgcagcacccccaggctgagatg
attgagcaggatatgaagcagctgagagtgagactaaggaagctgagagaggaccacgac
cgcatctaccacctgacccgttctgagggcctgccgagcgtcaactggggcaggatcata
gaggagaaacagggcaacctgagcaacaagagttttggtcaggacctgcccaccatagag
aacgaggtggaggaacacaacatctttcacagtgaggtggaggccctggcccctcacatc
tcagccagcgacgacaaggactctgccagtgccctccagctgaagtacaacaagctcctg
gccagttccagtgctcgacagcgccacctgttgagcctgcgtgactacatgcagcgctgc
actaatgagctgtactggatggaccagcaggcaggggagaggatcaactatgactggagc
gatactaacctggactaccctgcacgtcacagacagtatgagaacttcatcagtaagtgt
ctggagtccaaggaggccactgtcaccaagctgaatgatgatggagataaactcatcgct
gccaaccatcctggcaagaatgttattgaggctcatatggaggctgtgcatgcagactgg
aaggagtacctgaacctgctcatctgtgaggagaaccacctgaaacacatggacgaatac
cacaagttccacaaagaggcccgggacacccaggaccttctgaagagaatggacaaagag
gtggaccagaagtacaaaccagagttcaaggacatgtaccagatggagagcctcatcaga
gacctggacgaccaggcgaaggccatggaccactttgatgagcgtgtgaaggctctggag
aagcgcagtctacaggttctccccctccagttccgcaggaacacccctcagaagctgctc
cccgtcgaggcgctgtgtgagttcgacactgatgagggtcagatcctgcgtggagagagg
tacaccctcctgagtaacaaggggcccaagtgggaggtgaaggacgcggccgggcgtaaa
ctgacggctccgggggcctgcttcatggtcccccccacagacccagagtctgtcgccgtc
tccaacagtctggccggccagcagaagggtattaagatgaaggtgtctggcagtaagacc
accctggtcaaacgcctggaggaactgaagaaagacggctccgctggctctgacaaggag
gagcagcagtgtcgccagctgatggccggtctggacaaggtgaccagtgatctggacaaa
caggagaaggccatctactcacgagtacgcccccctctggagcagactaggccgctgcag
gacagcgctgaccgtctgcaggacgtcaaggacattgcggccgtggttcgtaagatcgag
ccggagaagtcgtccaaggtgagggaggctgagaagttcctgacctctaaccctaaatgt
gccagcgcccctcagctgaacggcaaggtgaacgaggccaacaacaaatacgacaagatc
aacctgctgctcaagtgctcagaggacaagcttcagaattccaaccgcctggagaactcc
cttcaaaacgggaaatctttattgtccagctacgagaacaagctggccagggaggaagtc
gccccagcagacatctcatctctggagaagacacagcgtcaactggctgatattgcatca
gagctgaagaccaagaggtccgcggtgacggagacggaggctaacctgcgtgcggccaaa
ggcagctgtgacaccatggcaaccaagctgcaggagcactgccccgacatcgacaggcag
gagggagaggtccggagacttaacaaacgctacgacaacctcaacaggcagatcgacacc
agaactcagagcctgcagagggctaagacgtcgtacagtaactaccgcagtgactacgac
aacctgaacaactggctgtcccgcgtgccaaactatgagccaactgagaaagacaacctc
agtcaggtggaaaccaagctggaaaaccagaagaacctgctctccgacattaaaaagaag
gagtctgagttgaacaacgtatcgaaaaatgcccaactttaccagcaagccgtcaaggac
tatgagaatgatactgagaagttcaagtctattctggaccttgaagacgggctggtcccg
cagacctacaagagaagcagactggagtcccctgcacttagggtcaaggaagaggaatct
gccattgaagctaaattcaccgaagtgaatgcagttaacaagcaacggatggcgaatctg
cagtttgcacaaggacttatgaatcagcaatcagacgtgatcgtcagcaacaatgtccaa
caagtcagatctgctgctccgggagaagaagcctggaggatcgagagtcaactgaaagac
gagattcagaggagggagcagctggagaaggatctagagaaaatccagacggacatctac
atgttggagggccagaagccagaggacaccgtcgtcaagaaggagatcatcaagaaggtt
ccggatccgactctggtcgacgaggtccacaatgtccgtcagaaactgtcagacgaaacc
cgggtcacccgggccatggacaacgagctggaggcgctgaggctgaagctgcgcggcatc
gaaacagagatcaaagaaggagcacagcagtacaccgtgaaggaggtgctgcgtatcgag
agggaccgcggccaggaggaggaggtgaggaggctcagggaggagctggaagagctgagg
aggaggaagaccatcaaggacaacgaggtgatccagatcaccaagcaggtgacgctcctg
gcacagcagaagtccaaggagcaggaagtgatcacagaggaggaggtgattaaagtgcaa
aacgacccgcaactggagaacgagtaccgcatcctcttggacaggaagcagaaggagcag
gagggcaggaagcaactggaggacgagctgcgcttcctccaggacaagctccgcaggctg
gagaaggagaagtccatggccgaggagaagatctccatcaaggaggtgctgaaggtggag
aaggatatcgcctttgagagggaggtagagaatctcaggatgcaacatgaggatgagaag
gccaagcaccggtcttcccaaagggagcgcgccgacctccagaggaagatctccagccta
gaggaggaaaagtcaagggtcatagttcaggagaaggtgagggagatcgtcaggcctgac
cccaaggctgaggctgaagtggccaacctacgcatggaactggtggaacaccagaggagg
tacagagacgccgaccagcagctgaaatcccaccaggacgagctgaagatgctgagaaac
agaggtccgcagatcgagatcaaggagatcatcaaggaagtcatcaagtacaagacagac
ccgcagaccgagagggagctggagaaactccgcaatgagattgtggacaagacgtaccag
acggagaagtcagagatggagatcaggcagctgagggacgagattcagaggtggaaggac
accaagccacaggtgcaaattaaagaggtggttaacgaggtgctggagtacaaagaaaac
cccaagaccaaggaggagattgagatcctgaagaggaagctggcggacgagcagaagaaa
cgcctggacctggagagggagcgatcagctaatgaggagaagatccggctaaggaagatc
gacctgtcccaggtcagggagaaggttgtccagcaggaggtggttaagatggaggaggac
ccattactgaggtcagagtgcagcaccttcacacagaacatcaacaatgaacagaggcag
agggagaccctgaaagaggagctcttccaacttcagaggcagaaggccaacctggacgca
cagctggaggagctggagcgagaacgccgagctcggcgcgatgcagagctggagatccag
aggctgagggtcaggttgaacgagatggaggtcagggacaaggagaacagggagagggtc
acagtgaaacagatggtggttctccagcaggacccccagcaagagaaagagcactccatc
ctcaagctgcaggtggaggaggagagacacaagcgcaccctgctggagaaggagctgaac
gtcctgctccagcagcaggtcaccctggagaggatggtggtgaaggagaaggttgtgcgc
accgagaccatccaggtagagaaagacccggaggctgagctggagatcgagaagatgacg
aggacgctggaacaggagaagaggaggaggctcgagctggaccaggagctgggcagcctc
aagtcccgcctgtccgacatggagttcaccaacaccaagtcgtccaaggagctggactac
atccgtgacgagagcagtcgcctccagcaggagaaccagaggctacagaatgacatccgc
aggctgcagtccgagatccagatcacctccacggagacccggagcatctccaactcggcc
cccatggagagcgggaagaacctagagctgaggctggactcactgcagagggagctggcc
gaactgagggccatcaccagccagaaggatgaggagatcgagaagctacagaagagcctg
tcggccatccagatcaagagggagcagagggagagccacctgaggagatccatcgtggtc
atcgaccccgactcgggtaaggagatgaggccagaggaggcctacaagctggggctgatc
gactggaagatgtttgtgaacctccagagccaggagtgcgactgggaggagatcagtgtc
aagggccccaagggggagtcctctgttctccacgacaggaagtctgggaagaagttctcc
attgaagacgccctgagggctgggaacatcaccaaccgccagctgcagcagtaccatgac
aaggagatcaccatccaggagttcggagtcatggtgtcgggaaagaccaagtga
DBGET
integrated database retrieval system
