Oncorhynchus tshawytscha (Chinook salmon): 112226297
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Entry
112226297 CDS
T05605
Name
(RefSeq) mucolipin-1-like isoform X1
KO
K04992
mucolipin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112226297
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112226297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112226297
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112226297
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Gene cluster
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Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112226297
NCBI-ProteinID:
XP_042158209
UniProt:
A0A8C8EWW6
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Position
LG20:16769280..16784889
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AA seq
576 aa
AA seq
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MEFIHVLQSIAMASLNCNCIQDGTEKDELFSPVSSYRSDDLSGRNPRVTGLVDSELRQQQ
QEEEALRRKLKYFFMSPCDKYHAKGRKPFKLVLQLLKILIVTVQLVLFGLSNQMVVTFKE
ENTASFKHLFLKDYRDGSSMAIHTQSELYSHIYYAVDQFLALPQTSVGRYAYVWGEGVNE
SALSLCQRYYKRGIIDPINDTFDIDPKVITDCIGVDPLPDPPSPDYSDYKNFTLQFHKLI
NVTIQFQLKAINIQTIINNEIPDCYTFAIMVVLDNKAHSGRVKISLLNHASIKKCKDPNV
WGHAENYAREAFDVLVAIVCLLSLLLCGRSILRGVILQHEYVQFFRHRLNHSVCWADRME
FINGWFILLIISDLLTITGSFIKIGIESKNMSLYDVCGILLGTSTLLVWVGVLRYLSFFQ
KYNILIVTLRAAFPNVIRFCLCVAAIYLGYCFCGWIVLGPYHTKFRSLSMVSECLFSLIN
GDDMFVTFAEMQKSGTLVWVFSQVYLYTFISLFIYMVLSLFIALITGAYDAIMAQTQEPM
HITDLHAFIAECTDTPCSGKFRGPEASSCSFFCCCD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaattcattcatgtcctacaaagcatcgccatggcatcattgaactgtaactgcatc
caagacggtacagagaaggatgagctgttctcacctgtgagcagctacaggtccgatgac
ctcagtggcaggaacccccgggtcaccggtctggtagactcagagctcaggcaacagcag
caggaggaggaggcactgcggaggaagctcaagtactttttcatgagcccctgtgacaag
taccacgccaagggccgcaagccctttaaactggtcctgcagctgctcaagatcctcatt
gtcactgtacagttagttctgtttggcttgagtaaccagatggtggtgacattcaaggaa
gagaacacagcatccttcaaacaccttttccttaaagactaccgggatggctcttcaatg
gcaatccacacacagagtgaactctatagccatatttattatgctgtagatcagttcctg
gctctaccacagacatcagtggggcggtatgcatatgtgtggggtgagggtgtgaatgag
agtgccctctctctgtgccagcggtactacaagaggggcatcatcgaccccatcaacgac
acctttgatatcgaccccaaagttattaccgattgcattggtgtggacccactaccagac
cctccttctcctgattacagtgactacaagaacttcactctccagtttcacaagctgatc
aatgtgaccattcagttccagctgaaggccataaacatccagaccatcatcaacaatgag
atccctgactgctacacctttgctattatggttgtcctggataacaaggctcacagcggc
agagtgaagatcagcctgctcaaccatgcctccatcaagaagtgcaaagaccccaacgtg
tggggacatgcggagaactatgcacgggaggcttttgacgtgctggtggccatagtgtgt
ctgctgtccctgctgctgtgtggtcgctccatcctcagaggagtcatcctacaacatgag
tatgtccagttcttcagacacagactgaatcacagtgtgtgctgggcagacaggatggag
ttcattaacggctggttcatcctgctcatcatcagtgacctgctcaccatcaccggcagc
ttcatcaagattggcatagagtccaagaacatgtcgttgtatgatgtgtgtgggattctg
ctcggtacctccactctgctggtgtgggtgggagtcctccgctacctcagtttcttccag
aagtacaatatcctgattgtgacgctgcgggctgccttccctaatgtaatccgcttctgc
ctctgtgtagctgccatatacctgggttattgcttctgtggctggatcgtgctgggtcct
taccataccaagttccgctctctgtccatggtgtcagagtgcctgttttctctgatcaac
ggggacgatatgtttgtgacgtttgctgagatgcagaagagtggcacgctggtgtgggtg
ttcagccaggtctacctctacaccttcatctccctcttcatctacatggtgctctccctc
ttcattgcgctcatcaccggagcctacgatgccatcatggcccaaacccaggagccgatg
cacatcacagacctgcatgctttcatagcagagtgtactgatacaccttgctctggaaag
ttccgtggcccagaggcatcctcctgttcattcttctgctgctgcgactga
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