Oncorhynchus tshawytscha (Chinook salmon): 112226325
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Entry
112226325 CDS
T05605
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112226325 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112226325 (nup85)
03036 Chromosome and associated proteins [BR:
otw03036
]
112226325 (nup85)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112226325 (nup85)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112226325 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
112226325
NCBI-ProteinID:
XP_042173671
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MEEVDVEPTTTPIPGFDSNQKHLGFVWGPGDILVYETIYKASGGSAGGCPFVHEVRKDED
IYSPILRKLFNESHHIFVGLQRIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TQDAALATQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLVLHLLDWVRLHKADVDEKAR
EVLASESPAEHQAYWDVVISYVLQGRMDEARQVLVKQAALQPAARVMFKLLDNLLMKMPI
FNPGETQTLTEFDVKWRHWREEVDHCLQDQSFASNRHLEDICKILVGDEDVLLEYKELLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSSMHMFLDTRSVPEPLDSILLAAFEFDIHQVIK
DCSIALNNWWFVGHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKALKVIRICEQRQMTEQVRSICKIMAKKALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSDAAKLLLSLMTAKIAPHSFWMTLLTDALPLLEQKEVIFSADQTHELMF
CLEELTSGKSVPTPDRPMQDEDIETTKIELLRLALARNLAMAIVKEGTVEV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtggagccaacaactactcctatccctgggttcgacagcaaccaa
aaacacttgggatttgtgtggggtcctggagatatcctggtttatgagaccatttacaaa
gcatcaggtggatctgcagggggttgtccctttgtccatgaggtcaggaaagatgaggac
atctattcccctattttgcgtaaactcttcaatgagtcccatcacatctttgttggtctg
cagaggatcagagaggatctgcccagcaagaacaagaaaccccagttcgtcagtattagc
aagaactacaggtctgtgattcgagcatgcatggaggaactccagcaagttgcagtttct
acacaagatgcagcattggctacacagtatggaaatcaggtgtcaatcctgctggcagta
gagctgatctggaatctttgtgaagtgttgttcatcgatgcagctccagctggctccctg
gtgctccacctgctcgactgggtgaggctgcacaaggctgacgtggatgagaaggccagg
gaggtgctggcgagtgagagccccgcagagcaccaggcctactgggacgtggtgatcagc
tacgtgctgcagggccggatggacgaggccaggcaggttctggtgaaacaggcagctttg
cagcctgcagccagggtcatgttcaagctgctggacaacctgctcatgaagatgcccatc
ttcaatcctggtgagactcagaccctgacagagtttgatgtaaagtggagacactggcgc
gaggaggtggaccactgtctccaggaccagtcctttgccagcaaccgccacctggaggac
atctgtaagatcctggttggtgatgaggatgttctcctggagtacaaggagctgctgagt
acctggtatcacttcctggtcaccagactgctgttctcccaccccactgtcaagcccaca
gagctgcactactacgcacagtctagcatgcacatgttcctggacacgaggagtgtccca
gagcccttggacagcatcctgctggcagcctttgagtttgacatccaccaggtcatcaag
gactgcagcattgctctcaacaactggtggtttgtggggcatctgactgacctgctggac
cactgtaaactgctccagtctcacaacctacattttggctccaacctgagagagtttcta
ctgctggagtacgcctcaggactcttcacccatcacagcctgtggcagctggctgtggac
tactttgaccactgtccagagtttggccgtgtgtacctggagctacagatagagcgtgtt
cctctggacacggagcgcaaggccctgaaggtgatcaggatctgtgagcagaggcagatg
actgaacaagtgaggagcatctgtaagatcatggccaagaaggccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagagccaaagatgctgccttcgccaccctcata
tcagagaggtttctccaggactactgtgccaaagggaccttctctgatctggacctgatt
gacaacctgggtccagccatgctgctcagtgacaggcttacttttctagggaagtaccgt
gagttccatcggctgtatggcgagaagcgtttctcggatgccgccaagctcctcctctcc
ctgatgacggccaagatcgccccacattccttctggatgactctgctgaccgacgccctg
cccctgctggagcagaaagaggtgatcttctctgctgatcaaactcatgagctgatgttc
tgtctggaggagctgacctcagggaagagtgttcccaccccagacagacccatgcaggat
gaggacatcgagacgacaaagatcgagctcctgcggctagcgctagctcgtaacctggcc
atggccatagtgaaggaggggacagtggaagtttga
DBGET
integrated database retrieval system
