Oncorhynchus tshawytscha (Chinook salmon): 112226384
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Entry
112226384 CDS
T05605
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112226384
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112226384
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112226384
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112226384
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
O-linked Gal type
112226384
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Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
112226384
NCBI-ProteinID:
XP_042163803
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Position
LG28:33488737..33496898
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AA seq
554 aa
AA seq
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MLQPTELSDPLCSSAAADHSVDNTTAMLQEWIRGVQSQYHSVKWTPMEGPSSHVGELGPK
HWPNSRFTHVMKLKQAALRSARALWADYILFVDTDNLLTNRRVLTEMIAENLTVVAPMLE
SRVLYSNFWCGVTPQGYYKRTPEYIPIRNWKRQGCFAVPMVHSTFMVDLRRSATRALAFH
PPHHDYTFPLDDIMVFAFSARRADVQMYICNREHYGYLPLPLKQEQSLEEEVESFSHTMT
EALIDYLMKPSKYMHHTAKPLEKMGFDEIFLINLKRRIDRRDRMLSTLAVLGIDITLTEA
VDGKALNSSQLQAMGIDMLPGYKDPYSGRVLTRGEIGCFLSHYNIWKQVVEQGLQRVLVL
EDDVRFEPRFRSRLVTIMENVDRVGLDWDLIYVGRKRLQVKQPERWVEGVSNLVHPDYSY
WTLGYALSLQGAKRLLGARALGKMLPVDEYLPVMFNKHPREEYMAQFEQRDLLAFSVEPL
LLFPTHYTGEPGYFSDTETSTIWDDEATTTDWDRQNTQRSSKQDGQGRPMPPGIAKEGGG
VPSPSSASNQRDEL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaccaactgagctttctgatccactttgttccagtgctgctgcagaccacagt
gtggacaacaccacagccatgctgcaggagtggatcagaggggtgcagagccagtatcac
tctgtgaagtggacacccatggaaggaccaagctcgcatgtgggtgagttagggccgaag
cactggcctaactctcggttcacccacgtgatgaagctaaaacaggctgctcttagatca
gccagggctctctgggctgattacatactgtttgtggacactgacaacttgctgaccaac
cggcgggtgctgactgagatgatagcagagaatttaacggtggtagcgcccatgttggag
tcccgcgtcctctactccaacttctggtgtggtgtgaccccacagggttactacaagcgc
acccctgagtacatccccatcaggaactggaaacgccagggctgcttcgctgttcccatg
gtgcactctaccttcatggtggacctgaggcggagtgccacccgggcgctggccttccac
cctccacaccacgattacacctttcccctggatgacatcatggtcttcgccttctccgcg
cggcgggcagatgtgcagatgtacatatgtaatagagagcattatgggtatctgccactg
cctctgaagcaagagcaaagtctggaggaggaggtggagagctttagccacactatgacc
gaggctctgatcgattacctcatgaagccgtccaaatacatgcaccatacagctaaacct
ctggaaaagatgggatttgatgagatctttctgattaatctgaagcgtcgcattgaccgg
cgggatcgaatgctgagcacccttgccgttctgggcattgatatcacactgacagaggcg
gtggatggcaaagccctgaactcgtcccagctgcaagcgatgggcatagacatgctgcct
gggtacaaagacccgtattcagggcgtgtgctgacgcgaggggagatcggctgcttcctc
agtcactacaatatctggaaacaggtggtggaacagggactgcagcgtgtgctggtgctg
gaggatgatgtgaggtttgagccgcgtttccgcagcagactggtgaccatcatggagaac
gtggaccgagtgggactggactgggatctgatctatgtggggcgtaagcggctgcaggtg
aagcagccggagcgctgggtggagggggtcagtaacctggtacaccctgactattcctac
tggaccctgggttacgccctctccttgcagggggccaagaggctcctgggagcccgggcc
ctgggcaagatgctacctgtggatgagtacctgcctgtcatgttcaacaagcacccacgg
gaggagtacatggcccagtttgagcagagggacctgctggcgttctctgtggagccgctg
ctcctcttccccacccactatactggcgagccgggctacttcagcgacacagagacctcc
accatctgggacgatgaggccacaaccaccgactgggaccggcagaacacccagcgaagc
agcaagcaggacggccagggacggcctatgcccccaggcatcgccaaggaaggaggaggc
gtgccctcaccctcctctgccagcaatcaaagagatgaactctga
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