Oncorhynchus tshawytscha (Chinook salmon): 112226392
Help
Entry
112226392 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: SH3-containing GRB2-like protein 3-interacting protein 1
KO
K20065
SH3-containing GRB2-like protein 3-interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226392
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112226392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
Adap_comp_sub
Motif
Other DBs
NCBI-GeneID:
112226392
NCBI-ProteinID:
XP_042163746
LinkDB
All DBs
Position
LG28:complement(34646811..34713647)
Genome browser
AA seq
928 aa
AA seq
DB search
MIQGLKKRTRKAFGLRKKEKDTDSTGSPDKDGVSRRKKNTNGAPNGYYGEIDLDRYAAPD
VDADGFSLRPGEERETAPKGKQHFSSSDTEDEDDNRKFKIKIKPLPSDTAKCAIPSMDEL
KASVGGLALSPSLRRSPRRSPGSIKRHLSCEEIARPRRSTPTPSPAPETQSERVSQNRRA
SPAFFGPPHETTYETHRYDSNRNDGEEIARPRRSTPTPRPAPETQSERVSQNRRASPAFF
GPPHETTYETHRYDSNRNDVVCIEADAWCDSRPDCDSPLTRNFPTGAPPPLPPKNIQAAS
QGYSSSDSSVDLHNGRIVSSPAPIYLNVQSPASYRGSPVPDLEDVFGPMESCRINEGRAS
PRWVSFNSERPPPPEEPAPPPPPAYPPPDSPNSLSSTPDSPCLSRALLRMSLPLPAAPFP
LPRLAHLHHLHSPSRXTRSPLPPDFLPPDSPPCIAINPSLFLDDDEILEYSHAPSSPAAP
LEYSPAPTSPIPPPLPAERSLRAGIPSPLVFLREEQPDFMSWPLVLTPGFRGVPSPLLPP
AYRPMVSSPGPCPGSGPSSPPRPATPLSGGSPVPPPLPTRPSSRPKLPPGKPMGDLARPF
SPQSPAAPSLRPLARAESSSSITLLSAASTPTLGRELNISTTGCSRGPSPLTMGAQDTLP
VAAAFTETINAYFKGADPSKCVVKITGEMVLSFPAGITRHFASHPSAPVLTFSISNYCRL
EQVLPNPHLLCCDTTMSNVDTKEFWVNMPNLMSHLRRVADQKPQATYYNVDMIKYQVAAE
GIQSTPLNLAVSWRGDTTSTDLRIDYKYNMEAMAAAPSPLHNIHFLVPVDGGVAKLQAMI
PTATWNPEQQNILWKISSLSQRSENGGVGALLGRFQLTEGPSKPSQLAVQFTSEGSTLSG
CDIQLMGPGYRLSLVKKRFAAGKYLADN
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaggactgaagaaacgcaccaggaaggcctttgggttacgaaagaaagagaag
gacacagactccacgggctcccctgacaaagatggagtaagtaggagaaagaaaaacacc
aacggggctccaaatggctattatggggagattgatttggaccgatatgccgctccagat
gtggacgctgatggcttcagtctcagacccggagaggagagagaaacagctcccaaaggc
aagcagcacttctcctccagcgacactgaggatgaggacgacaacaggaaattcaagatt
aagatcaagccgttgccctccgacactgccaagtgtgccatcccctccatggatgaactg
aaagcttccgttggaggtttggctctgtctccctctttgaggagaagtccgagacgcagc
ccgggctcaataaagagacacctgtcttgtgaggagatcgccagacccagacgctccacc
cctacgccaagccccgcccccgagacacaaagtgagagagtatcccagaatcgcagagca
tccccagctttcttcgggcctcctcatgagacgacctatgagacacacagatacgatagt
aacagaaacgatggtgaggagatcgccagacccagacgctccacccctacaccaagaccc
gcccccgagacacaaagtgagagagtatcccagaatcgcagagcatccccagctttcttc
gggcctcctcatgagacgacctatgagacacacagatacgatagtaacagaaatgatgta
gtctgtatagaggctgatgcatggtgtgactccagaccagactgtgactcccctttgacc
agaaactttcccacaggagctcctcctccacttcctcccaagaacatccaagcagctagt
caaggctattcttcgtctgattcttccgttgatttacacaatgggagaatagtatcaagc
cccgcccccatctacctgaacgtccaatccccagcctcatacagaggttcccccgtgcct
gacctggaagatgtgttcggccccatggaatcctgccggatcaatgagggcagggcctcg
ccccgatgggtcagcttcaacagtgagagaccacccccaccagaagaaccggccccgcct
ccgccccctgcctatcctcctcctgactcgcccaactccctctcttccaccccagactcc
ccctgcctctcccgggccctcctccggatgagcctccccctccccgccgccccttttcct
ctcccccgactcgcccatctccatcatctccattccccctccagatgaacccgttccccc
ctgcctccagacttcttgcccccagactccccgccatgcatcgccatcaatcctagtctg
tttttggatgatgatgagatactggagtactcccatgctccctcttcccctgctgcccca
ctggaatactcccctgcccctactagtcccatccctccccccctgcctgcggagcgctcc
cttcgggcaggcatcccttcccctctggtgttccttagggaggagcagcctgactttatg
tcctggcccctggtgctgaccccgggcttcaggggtgtgccgtcccccctcctcccgccc
gcctacaggcccatggtgtcttcccccggaccctgcccaggcagtggtccctcctctcca
cctcgccctgccacgcccctgtcaggaggtagtccagtccctccccctcttcctacaagg
ccctcctctcgacccaaactaccccctgggaaaccaatgggagacctggctcggcccttc
agcccccagtctccggcagccccctcccttcgccccctggcccgagccgagagttcctcc
tccatcaccttgctgagtgcagcctccacccccaccctggggagagagctcaacatatcc
actacaggatgctccagaggacccagcccactgaccatgggagcccaggacactctgcct
gtggcggctgccttcactgagaccatcaacgcctatttcaaaggagccgaccccagcaag
tgtgtggtgaagatcactggggagatggtgctgtctttcccagcaggcatcaccagacac
tttgccagccatccgtctgcccctgtgctcaccttcagcatcagtaactactgtcggcta
gagcaggtcctccccaatccacacctactgtgctgtgacaccaccatgtccaatgtggac
accaaggagttctgggtaaatatgccaaacctgatgagtcacctgaggagagtggctgac
cagaagcctcaagcaacctactacaatgtggacatgatcaaatatcaggtagcagctgag
gggatccagtctactcccctgaacctggcggtgagttggcgtggcgacaccaccagcacg
gacctcagaatagactacaaatacaacatggaggccatggccgcagccccctcccccctc
cacaacatccacttcctggtccctgtggacgggggcgtggccaaactccaagccatgatc
cccactgccacctggaacccagaacagcagaacattctatggaagatatcaagcctttcc
caaaggtctgaaaatggaggagtgggggctctactgggtaggttccagttgacagagggt
cccagtaagccgtcccagttggcggtgcagttcaccagcgagggcagcactctgtcaggc
tgtgacatccagctgatggggcctggctacaggctctcgctggtcaaaaagagatttgca
gcagggaaatatctggcggacaactag
DBGET
integrated database retrieval system
