Oncorhynchus tshawytscha (Chinook salmon): 112226416
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Entry
112226416 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 29 isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112226416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226416
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112226416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C1_1
Motif
Other DBs
NCBI-GeneID:
112226416
NCBI-ProteinID:
XP_042164268
LinkDB
All DBs
Position
LG28:complement(40065859..40130078)
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AA seq
1484 aa
AA seq
DB search
MLRKSSDTGGGGRGGGGESNTKPNKQHRSSSTQGLSRFSNPDTGSPSTGSTKTWDMDRSS
RPPLGSVGLGITVAGAPGADPDYVMQLLNDVRRFADVLLSLKETCHSKESRDALPQRVQE
RLGELLRVLKSVIGKHHTLNSVDILRAAGTVIAKVKGINVKEVNQENKTAIFGEIYASID
TLAFTFGNVVSDFLMGDVDSQSGLGIPPTRRSRSSENLSVDSGRCVPEKDTGWKNDLVGP
EVALSEEEEEEDVDLTLQNNDSGVESALLYAKAWSKYTKDLLAWVDKRLGLDIECAKSCA
KMAESAKMLASQQDYMPFRETYISTFKNDTEYSQLLLQTATALQTNKFIQPLLSRRTELD
RLRKDLNEQWQREQKKMQESEAALRKAQWAQTQRTDEYQKAQSSASRSQEEQPRQLDKKR
KLEEEALQKAEDARDHYRSCVADAGARRAELASTKTDILTQIRELLAQCDLTLKAVTVNW
FQLQQAQTVSLPGHYQALCENAKMYEPGQKYAEFVRNLPKDQIHMESFSVDGRFALFSKR
SLGSTSSHGNLSQVSLTSDDVLSGDEVDSPLGSRPGKRSNSATDIQGDFKRRLPRTPSTG
TMSSADDLDERQPYSDNGLGEMVTEADGSPGPFRNAQMSKASQTHKLRKLRAPSKCRECD
SLVVFHGAECEECSLACHKKCLETLAIQCGHKRLQGRLQLFGIDFTQAAKNSPDGIPFII
RKCTSEIEGRALNLKGIYRVNGAKSRVEKLCQAFENGKDLVELSDLSPHDIGNVLKLYLR
QLPEPLILYRYYNDFIGLAKASQRVIIEEKAIARALQDQGRPGGEQPGPGGTQPGVEGEQ
PPLRTSQPGGDQPSIKLNRVIFKIRDLLRQLPPANYKTLRFLIAHLHRVTEQAEENKMTA
SNLGIIFGPTLVKPRQTDAEVSLSSLVDYPYQALMVELLVRHFQMIFDVASPSSSSSSST
ADQTSTRLTLQEEQRLSLRSVSLLDIKESTKVCKRHSSVIPSSHILDEEKTGRTGPDRRE
LTALERLNGVGSAAAGAPKVQRSTLVFGRPSINLSSSTSSTAPRVQLRSQRSRILFRPIS
MPLERLPLPTPSQVVERNNQNTNDAAMLDPTADSITESAEPEKETPRIGEGSRVSTYFIT
PFNPQAVQRRTWDRKYKHYDVTPRTAMIMANLPPAGAGPGTQPTGKQPTMPTQPSVSGPT
SSALPSSGSVGTIFPNSPYTLSGKAGQTSRRDREETKDRPNSAAGGGGETRTSTNSPIAF
RQPRNLQPPPGTFYKPPGGSSATRGWPSSSTSGTTSPINMSPTPTVKSSSPTSPTVKSSS
PTVKSSSPTSPTVKSSSRPLLLLNPLLRPLLLLNPLPRPLLLLKPLLLLLKPLLLLLNPL
PRPLLLLKPLLLLLKPLPRPLLLLSSSSLPPIPPPLLSPLPLWLPPPPFRPQTSPYTVHR
TQWTALLVLTLRLRPPLTFYLPGPLPPAAQRTSAPLRPNRCTKD
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgttacggaagagcagtgacactggaggaggaggaagaggaggaggaggagagagtaat
actaaaccgaacaaacagcatcgctccagctccacccagggcctgtctcgcttctccaac
cccgacacagggtcaccgtcgactgggtcgacaaagacctgggacatggaccggagctcc
aggcctcctctggggagtgtggggctggggatcaccgtggcaggagcgccgggggcggat
ccggactatgtcatgcagctgttgaatgacgtgcggaggtttgcagacgtgctgctcagc
cttaaagaaacctgccactctaaagagtcccgtgatgctctccctcagcgggtacaggag
aggttgggagagctgctgcgagttctcaagtctgtcatcggcaaacaccacaccctcaac
tctgtagacatcctcagggccgcgggcaccgtcatcgctaaggtcaaaggcattaacgtc
aaggaggtaaaccaggaaaacaaaaccgctatatttggcgagatatatgcgtccattgac
actttggcattcacatttggcaatgtagtgtctgactttcttatgggagatgtggacagc
caatcagggttggggatcccaccgaccaggagaagcaggtcttctgagaatctctctgtg
gattctgggagatgtgttccagagaaggatactgggtggaagaatgacctagtgggccca
gaggtggcgctgtctgaggaggaggaggaggaggatgttgacctgacgctgcagaataac
gacagcggggtggagtcggctctgctctatgccaaggcctggtctaagtacaccaaagat
ctgctggcctgggtcgacaaacgcctgggactggacatcgaatgtgccaagagctgtgcc
aaaatggcagaatctgcaaagatgcttgcgagtcaacaggactacatgccattcagggag
acctatatctctacgtttaagaatgacacagagtacagccaactcctcctgcagactgcc
actgccctgcagaccaacaaattcattcagccgctgttgtccagaaggactgagctggac
agactgaggaaagacctcaacgagcagtggcagagagaacagaagaaaatgcaagagtcc
gaggcggcgctgcgtaaggcccagtgggcccagacccagaggacagatgagtaccagaag
gcccagtcgtcagccagccgctcccaggaggaacagcccagacagctggacaagaagagg
aaactggaggaggaggctctacagaaggctgaggatgcgagggaccactacagatcctgt
gtagctgatgcaggagccaggagggcagagctggccagcaccaagacagacatcctcact
cagatcagagaactgctggctcagtgtgacctcacactcaaagctgtgaccgtcaactgg
ttccagctgcagcaggcccagaccgtgtctctccccggccactaccaggccctgtgtgaa
aacgcgaagatgtacgagcctggacagaaatacgcagagtttgtcagaaatctacccaaa
gatcagatacacatggagtccttctccgttgacggacggtttgctttgttcagcaagcgt
tcgctgggcagcacgagttcccatggtaacttgtcccaggtgtccctgacctccgatgac
gtcctgagtggggacgaggtggacagtcccctggggtcgcgacctgggaagaggtccaac
agcgccacagacatacaaggtgactttaaacgcagactacccagaaccccctccactggc
accatgtcctcagcagacgacctggatgagagacaaccatactcagacaacggtctgggt
gagatggtgaccgaggcagacggttccccaggtccgtttcgtaacgcccagatgtccaag
gcgtctcagacacacaagctgaggaaactcagagcgccgtctaagtgcagggagtgtgac
agtctggttgttttccacggagcagaatgtgaagagtgctccctggcctgtcataagaag
tgtctggagaccctggccatccagtgtggtcataagaggctgcagggaagactacagctg
tttgggatagacttcacccaggcagctaagaacagcccagatgggatccccttcatcatc
aggaagtgtacctctgagatcgagggcagagcactcaacctcaagggaatctaccgtgtg
aacggggcgaagtctcgtgtggagaagctgtgtcaggcgtttgagaacggcaaggacctg
gttgagctctctgacctctcaccccacgacatcggcaacgtgctcaaactctacctgaga
cagttaccagagccgttgatcctgtaccgctactataatgacttcatcggattggccaag
gcgagccagagggtgatcatcgaagagaaggctatagccagggccctccaggaccagggg
cggccagggggagaacaacccggaccaggaggcacccagcctggggtagagggagagcag
cctcccctgagaaccagccagcctggaggagaccagcccagtatcaaactcaatagagtc
atctttaagattcgagacctgttacgacagctacctcctgcaaactacaagactctacgc
ttcctcatcgcacacctacacagagtgacagagcaggcggaggaaaacaagatgacagcc
agtaatctgggtattattttcggccctacgctggtcaaaccacgacagactgatgcagag
gtttccctgtcttctctggttgattacccttaccaggcactgatggtggagttgctggta
cgtcacttccagatgatctttgacgtggccagcccctcctcttcctcctcctcctccacg
gcggaccagacctccacccgactcacccttcaggaggagcagagactcagccttcgctct
gtctccctgctcgacatcaaggagagcaccaaagtctgcaagagacactcgtcggtcatc
ccatcctctcatatcctggatgaggagaagacaggaaggactggaccagacaggagagag
ttaacagccctggagaggctcaacggcgtcggttctgctgctgctggtgctcccaaggtg
cagaggtctacccttgtgtttggccgtcccagcatcaatctctcctcctctacctcctct
acggcccctcgggtccaacttcgctcccagcgctcgagaatactgttccgaccaatcagc
atgcccttggagcgcctgcccctccccaccccctcccaggtcgttgagaggaacaaccag
aacaccaacgacgccgccatgttggatcccaccgctgactccatcacggagtcggccgag
ccggagaaggaaacgcctcggattggtgaggggtcaagggtcagtacctactttatcaca
cccttcaatccccaggccgtgcagcgtaggacctgggacaggaagtacaaacactacgat
gtcacgccgcgcaccgccatgatcatggctaatttaccacctgccggtgctggccccgga
acacagccgacagggaagcagccgacgatgccgacacaaccatccgtatctgggccgact
agctctgctctcccatccagtggaagtgtcggcaccatattccccaacagcccttacacg
ttatcggggaaggctggccagacgtccagaagagacagagaggagacaaaggacaggcct
aactctgctgctggaggtggtggggagactagaacctctaccaactcccccatagcgttc
agacaaccaaggaatctgcagcctccgcccggaaccttctacaagcctcctggtggttct
tcagccacgagaggctggccatcatcaagtacctctgggaccactagccccatcaatatg
tccccaactcctactgttaaatcctcttccccgacctctcctactgttaaatcctcttct
cctactgttaaatcctcttccccgacctctcctactgttaaatcctcttcccgacctctc
ctactgttaaatcctcttctccgacctctcctactgttaaatcctcttccccgacctctc
ctactgttaaaacctcttctcctactgttaaaacctcttctcctactgttaaatcctctt
ccccgacctctcctactgttaaaacctcttctcctactgttaaaacctcttccccgacct
ctcctactgctctcctcctcctcgcttcctcccattcctccaccattactttctccacta
cccctatggttaccaccgccacccttcagacctcaaacctccccatacactgtccacagg
actcagtggacagctctgttagtgttgaccctgaggttgagacctccgctgaccttctac
ctccccggtcccctccccccagcagcccagaggacctcagccccactgaggccaaaccgc
tgcaccaaagactga
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