Oncorhynchus tshawytscha (Chinook salmon): 112226418
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Entry
112226418 CDS
T05605
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226418
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112226418
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112226418
Ion channels [BR:
otw04040
]
Other channels
Mechanosensitive channel (Piezo)
112226418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_RRas_bdg
PIEZO
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
112226418
NCBI-ProteinID:
XP_042163818
LinkDB
All DBs
Position
LG28:43595439..43711536
Genome browser
AA seq
2598 aa
AA seq
DB search
MFVYGDRMSGLVAKSKETSFDYISTLDSVENGPVHQDLYSTPQYEMDQINNMTEKDEGMC
GVSPTLREETSGMEGAEEEQEEEEGRVNAVVTVFRFIMKQSYVCALIAMMAWSITYVSWL
TFVFLMWSCMLWMVRDRRRYTMLTSPFMVLYGNLLIVLQYIWSFELLEPVPGLFLKMDVP
FRQLGSKILCLLSFWLLLIQTLTERQEEQREEAVVLTDVHVDNQPKKKKEEDEEGGEQDI
MQVLGNMVMEMLVKYWIYICGGMFFFVSFEGRMVMYKIIYMMLLLFCVALYQVHYEYWRR
ILKYFWMSVVVYTMLVLVLVYTFQFETSLPFWSNMTGMSKEKLKDLGLEQFSVSMLFTRI
FIPTSFLLVCILHLHYFHDHFLLLTDLKDVSQKQDSTIYRLVHQDGSLADITMLYSGEGV
IRVEDEKERNLMKEKNGGMKQKGGLCQSIDPCRSFNKSFESKSSSGPGKSGDCSVGTEPE
SSTEHTTSDLKNKWPLVVDRLTVLFLTFLEYFHKLQLFIWWLLEMHIVKIVSSCIILVSV
KEVSLFNYVFLACWAFALPFSQFRPLASSICTVWTCVIIVFKMSYQLESIQPASYSKNCS
MPMNSVTEKQREEMKDSLLYKEPVDPIHLLSSSSSSPLISFPLLIQNNLLMLAMLAFEVT
IYRHQQYYRLRNKLTAPAARIIFHDITRQHLDNGIVNCAKYFINYFFYKFGLEICFLLAV
NVIGQRMDFYAVLHAFSLIAVMYRRRRKSIAEIWPKYCCFLACLLTWQYFVCIGIPPAAC
EDYPWRFPNSTMDSNVIKWLYFPDFHTNPNPIFLVYDFMLLLCASLQKSIFEEENKAAVR
LMAGDNVEISRDLDAASFSVHNPVPDFIHSRSYLDMLKVITFSYLFWFVLTIIFITGTTR
ISIFCLGYIVGCFYFLLFGGELLLKPIKNILHYWDFLIAYNVFVITMKNILSILACGYIN
VLVVNNCWLIQLLSLACTIKEYKVVTNRDFTPADGGKKCDLPSDEAGIIWDSICFAFLLL
QRRVFMSYYFLHVVADIRASQILAFRGAELFQATIVKAVRARLEEEKQSMEQLKRQMDRI
KQRQEKFKRGKNMLSQESGDRENPIHLQGSGDRENPIHLQGSGDRENPIHLQGSGDRENP
IHLQESGDRENPIHLQGSGDRENPILPQESGDRENPILPQESGDRENPILPQESEDRENP
ILPQESGDRENPILPQESGDREYPILPQEQQVVRSGDYYLFETDSEEEEEEMERREGLLP
PKKSAFQQAIGKFASALIALPRSIIKLPKAIFQYVIRAAKFVYHVWITDSKTAMKKQSKE
KHKFWKRDIKRDKHKKDKMDGHVTIEFGETEEDQKGGEEKKSDGPDNVLKRVFNIIQFTW
VLFQTTVESFTKWMNNVCREHIDISTVLRIERCMLTREVKKGNVPSRDSIHVYYQKQMRI
YMSQGSSLDQLIEEDSVSWSHRVRRRRGSYRMESQDSIASMASRDSISSAYTEATMLFSR
QDTLDELDGMPPDIPIPKTSERVRPKLCKIYGLDASKSTDSSSSQVSSEATQCITLYSRQ
GTNDTIEEVDDEQDQGEDRQNEPLGPSHPETEEAEGSPWVDGPTSTFLALRSGSQDCTTD
SDDGGLRQEYRNTEERDRAGQLDTSDAPNTSDTDVPSSYNKAVSFDRLEVSEDESDRDDK
RMMAMTPDTSRSDYLDDPLLPSLTTELTASELLLNKMFHDEELEQSERFYVGQPLVLQLV
YALYNMLVAHSEMVCYLVIILNNMLSASCVTLVLPILIFLWAMLSVPRPSKRFWMTAIVY
TEVAIVIKYFCQFGFFPFNQNPKVNGNKPYHPPNIIGVEKKDGYVVYDLIQLLALFFHRS
ILKCHGLWDEDDLKDTKKEILRQDTESKEDKKERDATPVPFYSRERKGSTQTLRSINLGV
GTSVDSMHYLQQQQQTYQRRKSSSGGSHISHQSVHSVRSKRGSTNSRNSSRRDWSEVSVQ
QKTKKQLIMEKLKEQMIKAKTFTIKRTMKVYLPIRQFFYNLVHPEYSALTDVYVLMFLAD
TVDFIIIVFGFSAFGKHSAGADFTSSLSEDQVPGAFLVMILIQFGTMVVDRALYLKKTVL
GKVIFQVILVFGIHFWMFFILPGLSDRRFNENTVAKLWYFIKCIYFGLSAYQIRCGYPTR
VLGNCLTKSYNYTNLFMFQGFRMIPFLSELRAVMDWVWTDTSLSLSSWICVEDIYAHIFV
LKCWRESERRYPQPRGQAKKPVVKYGMGGMIVMLLICIIWFPLLFMSLIKSVVGVVNRPL
DVSFSITLAGFQPIFTMSAQQNQLREVSKHDIHGTFMSSYQSYPEAMRWLEYYMPEDLTI
AELEGSSNSLWTISPPSRTNIMEMLSSKEQFPITVAWSIQRNLTLGAKAEFATGKKVTFL
DDATKLELSLLLNGTRRDRVVIKHVFPRYLRAPSDSEAKPIEQLYKEKVYMSITLALERS
HNDSAEVQEWWIVNQTDPGQISVRRPKHLYDAGLELYVFSDQVSPPSLGFLAGYGIMGLY
ASVVLVIGKFVREFFSGVSHTIMFEELPNVDRILKLCTDIFLVRETGELDLEEDMYAKLI
FLYRSPETIIKWTRDKTQ
NT seq
7797 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtctatggagatcgcatgtctgggttggttgcaaagtccaaggagacgtctttt
gactacatctccaccctagactcagtggaaaatggaccggtccaccaggacctgtactcc
accccacagtatgaaatggaccaaatcaataacatgacagagaaggatgaaggaatgtgt
ggcgtcagtccaaccctgcgagaagagacttctgggatggagggagcggaggaggaacag
gaggaggaggagggcagagtgaatgctgttgtaaccgtgttcaggttcatcatgaagcag
agctatgtctgtgctctcatagccatgatggcgtggagcatcacgtatgttagctggctg
acgtttgtgttcctgatgtggtcgtgcatgttgtggatggtgagggaccgtcgtcgttac
accatgctaacctctcccttcatggtgctctacgggaacctgctcattgtgctgcagtac
atctggagctttgagctgctggagcccgtacctggactcttcctcaagatggacgtgccc
ttcaggcagctgggttccaagatcctatgcctgttgagcttttggctgttgctgatacag
actctgacagagagacaggaggagcagagagaagaggctgttgtactcactgacgtacat
gtggataaccaacccaagaagaagaaggaggaggatgaggaaggaggggagcaggacatc
atgcaggttctggggaacatggtgatggagatgctggtgaaatactggatctatatctgt
ggagggatgttcttcttcgttagcttcgagggacgcatggtcatgtataagatcatctac
atgatgctcctcctcttctgtgtggcgctctatcaggtgcactatgagtactggaggagg
atcctgaagtacttctggatgtctgtggtggtctacaccatgctggtcctcgtcctggtc
tacaccttccagtttgagacttctctacccttctggtctaacatgactggcatgagcaaa
gagaaactgaaggacctggggttagaacagttctccgtatcgatgctcttcacacgtatc
ttcatccccacctccttcctcctggtgtgtatccttcaccttcactacttccacgaccac
ttcctgctgctcacggacctgaaggatgtgtcccaaaaacaggacagcaccatctacaga
ttggtacaccaggatggaagcctggctgacatcaccatgctctattctggagaaggagtg
atacgggtggaggacgagaaggagagaaacctgatgaaggagaagaatggagggatgaag
cagaaaggaggactctgtcagtctatagacccgtgtcggtcattcaacaagtcttttgag
tccaaatccagttcagggccggggaagagtggagactgtagtgtgggaactgagccagag
tcctccacagaacacactacctcagacctaaagaataagtggcccctggtggtggaccgt
ctgactgtgctcttcctcacattcctggaatatttccacaagctgcagctcttcatctgg
tggctcctagagatgcacatcgtcaagatcgtctcctcgtgcatcatactggtctctgtc
aaggaggtgtccttgttcaactacgtgttcctggcgtgctgggccttcgctctacccttc
agtcagttcagacccctggcatccagtatctgtacagtgtggacctgtgttatcatcgtc
tttaagatgtcgtaccagctggaatctatacaacctgcctcttactccaagaactgctcc
atgccaatgaactcagtcacagagaaacagagagaagagatgaaagactctctgctctat
aaggagccagtagaccctattcatctcctctcctcgtcctcgtcctctcctctcatttcc
tttcctctcctcatccagaacaacctgctgatgttggccatgctggcgtttgaggtgacc
atctaccgtcaccagcagtactacaggctgaggaacaagctcaccgcgcccgccgctcgc
atcatcttccatgacatcacgcgtcaacacctcgacaacggcatcgtcaactgtgccaag
tacttcatcaactacttcttctacaagtttgggctggagatatgcttcctactggcggtg
aatgtgattggccagcgtatggacttctatgctgtgctgcatgccttctctctgatagcc
gtgatgtacagacgtaggaggaaatctatagctgagatctggcctaaatactgttgtttc
ctggcctgtctgctaacctggcagtactttgtctgcatcgggataccacctgcagcctgt
gaagactacccatggaggttccctaactctacaatggactccaacgtcatcaagtggctt
tatttccctgacttccacaccaaccccaacccaatctttctcgtctatgacttcatgctc
ctcctctgcgcctcactccagaagagtatatttgaagaggaaaacaaggcagctgtccgt
ctcatggccggagataacgtggagatctctagagacctagacgcagcctctttcagcgtc
cacaaccctgtccccgactttatacattccaggtcctacctggacatgctgaaggtcatc
acgtttagctacctgttctggttcgtcctcaccatcatcttcatcaccggcaccacccgt
atcagtatcttctgtttgggctatatagtgggatgtttctacttcctgctgttcggtggg
gagctgctgctcaaaccaatcaaaaatatcctccactactgggacttcctgattgcctat
aacgtgtttgtgatcactatgaagaacatcctgtctatcctggcctgtggttacatcaat
gtcctggtggtcaacaactgttggctgatccagctcctcagtctggcctgcaccatcaag
gagtataaggttgtcaccaacagagacttcacacctgcggatggtggtaagaagtgtgat
ctgcccagcgacgaggctgggatcatatgggacagtatctgttttgccttcctgctgttg
cagagacgcgtcttcatgagttactacttcctacatgtggtggctgacatcagggcctca
cagatactggccttcagaggggctgaattgttccaggcaactatcgtgaaggcagtcaga
gccagactggaggaagagaagcagtctatggaacagctgaagagacagatggaccgtata
aagcagcgccaggagaagtttaagagagggaagaatatgttgagccaggagtcaggagac
agagagaaccccatccatctacaggggtcaggagacagagagaaccccatccatctacag
gggtcaggagacagagagaaccccatccatctacaggggtcaggagacagagagaacccc
atccatctacaggagtctggagacagagagaaccccatccatctacaggggtcaggagac
agagagaaccccatccttccacaggagtctggagacagagagaaccccatccttccacag
gagtctggagacagagagaaccccatccttccacaggagtctgaagacagagagaacccc
atccttccacaggagtctggagacagagagaaccccatccttccacaggagtctggagac
agagagtaccccatccttccacaggagcagcaggtggtgagaagtggagattattacttg
tttgaaaccgacagtgaagaagaggaggaagagatggagagaagagagggtctactgcct
cccaagaagtcggcgtttcagcaagctattgggaagttcgcctcagcccttatagctctg
cccagatctatcattaaacttccaaaagccatctttcagtatgtaatcagggcagccaag
tttgtctaccatgtctggataacagactctaagacagccatgaagaaacaaagcaaagag
aagcacaagttctggaagagggacatcaagagagacaaacacaaaaaggacaagatggat
ggtcatgtgactatagagtttggagagacagaggaggatcagaagggaggagaggagaag
aagtctgatggaccagacaacgtcttgaagcgagtgttcaacatcatccagttcacctgg
gtgttgttccagaccacggtggagagcttcaccaagtggatgaacaacgtgtgtagagaa
cacatagacatctccaccgtgctgcgcattgagagatgcatgctcactagagaggtcaaa
aagggtaatgtcccatccagagacagtatccatgtgtactaccagaagcagatgcgtata
tacatgtcgcagggctccagtctggaccagctcattgaggaggacagtgtgtcgtggtct
cacagggtccgtagaaggagaggcagctatcgtatggagagccaggactccattgcgtct
atggcctccagggatagtatatccagtgcctacactgaggccaccatgctgttctcccgc
caagacacgctggacgagctggacggaatgccgccagacattcctattcccaaaaccagc
gagcgtgtccggcccaaactctgtaagatttacggcctggacgcttccaagtcgactgac
agcagcagtagccaagtgtccagcgaggcgactcagtgcatcactctctattcacggcaa
ggcaccaatgacaccatcgaggaggtggatgacgaacaggaccagggggaggacaggcag
aacgaacccttgggaccctcacatccggagacagaggaggctgagggaagcccctgggta
gatggtccaacttcgaccttcctggcccttcgatcagggtcccaggactgtaccactgac
agtgacgatggaggtctccggcaagagtaccggaacacagaggagcgggaccgggcgggt
cagctggacacctcggatgctccaaacacctcggacactgacgtgccttccagttacaac
aaggcggtgagctttgaccgactggaggtgagtgaggatgagagcgacagggacgataag
aggatgatggcgatgaccccagacaccagccggtcagactatctggacgatcccctgctg
ccctctctgaccactgagctgaccgccagcgaactgctgctcaacaagatgttccatgat
gaggagctagagcagtcagagcggttctatgtgggccagcccctggtgctccagttggtc
tatgccctgtataacatgctggtggcccactctgagatggtgtgttacctagtcatcatc
ctcaacaacatgctgtcagcctcctgcgtcaccctggtcctccccatcctcatcttcctc
tgggccatgctgtcggtacctagacccagtaagaggttctggatgaccgccatcgtttat
accgaggtcgccatcgtcatcaagtacttctgccagtttggcttctttcccttcaaccag
aacccgaaggtgaacgggaataaaccctaccaccctccaaacatcatcggagtggagaag
aaagatggatacgtcgtctatgacctcatacagcttctggcgctcttcttccacaggtcc
atcctgaagtgtcatggtctctgggacgaagacgaccttaaggacaccaagaaggagatc
cttcgccaggacactgagtcgaaggaagacaagaaggagagggacgccactcccgtgccg
ttctactcccgcgagaggaaggggtcgacacagaccctcaggtctataaatctgggcgtg
ggcacctccgtggactccatgcactacctccagcaacagcagcagacctaccagagaaga
aagagctccagtggagggtctcatatctcccaccagtcagtccactctgtacgctccaag
agaggcagcaccaactccaggaacagtagccgtagagattggagtgaggtgtcagtgcag
cagaagaccaagaaacagctgatcatggagaaactcaaagaacagatgatcaaagccaag
accttcactatcaagaggaccatgaaggtgtacctgcccatccgtcagttcttctacaac
ctggtccatccagagtacagtgctttgacagatgtctatgtcctcatgttcctggccgac
accgtcgacttcatcatcatcgtcttcggtttttctgcttttgggaaacactcagcggga
gccgacttcacgtcgtctctgtcggaggaccaggttcccggagccttcctggtgatgatt
ctgatccagtttgggaccatggtggtggatcgggccctgtacctcaagaagacagtgctg
gggaaggtcatcttccaggtgatcctggtgttcgggatccacttctggatgttcttcatc
ctccccggactctctgataggcgtttcaatgagaacacagtagccaagctgtggtacttt
atcaagtgtatctactttgggctgtcagcctatcagatccgctgtggctaccccaccagg
gtcctgggtaactgcctcaccaagagctacaactacaccaacctcttcatgtttcaaggg
ttccgtatgatcccgttcctgtctgagttgcgtgcggtgatggactgggtctggaccgac
acctctctgtctttatcctcttggatctgtgtggaagatatctacgctcacatcttcgtc
ctcaagtgctggagggagtcagagaggagatacccccagccgcggggccaggcgaagaag
ccggtggtgaagtatgggatgggagggatgatcgtcatgcttctgatctgtatcatctgg
ttccctctactcttcatgtctctgatcaagtctgtggtgggggtggtcaacagaccactg
gatgtctccttctccatcaccctggccgggttccagccgatcttcactatgagtgctcag
cagaaccagctcagagaagtctccaaacatgacatccatggcaccttcatgagctcatac
cagtcctatcctgaagcgatgaggtggttggagtattacatgccagaggatctgaccata
gctgagttggagggaagctctaacagtctgtggacaatcagtcctcccagtagaactaac
atcatggagatgctcagctccaaggagcagttccccatcactgtagcttggtctatccaa
cggaacctgactctgggagcgaaggctgagtttgcgactgggaagaaagtgacatttctg
gatgatgcaaccaaactggagctgagcctactgctcaacgggaccagacgagacagagtg
gtgataaagcacgtcttcccgcggtacctccgagcccctagtgactccgaggccaagcca
atagaacaactgtataaagagaaggtgtacatgagcatcactttggcgttggaacgttcc
cataacgactcagcagaggtccaggagtggtggatcgtgaaccagacagatccgggacag
atcagcgttcgtaggcccaagcacctgtacgacgctgggctggagctctatgtcttcagt
gaccaggtcagccctcctagtctgggtttcctggctggatacgggatcatgggtctgtac
gcctccgtggtgctagtcatcggtaagtttgtccgcgagttcttcagcggtgtctcccac
accatcatgttcgaggagctgcccaacgtggaccgcatcctgaagctctgcaccgacatc
ttcctggtccgagagacgggagagctggacctggaggaagacatgtacgctaaactcatc
ttcctctatcgctcgcctgagactattatcaaatggaccagggacaagactcagtga
DBGET
integrated database retrieval system
