Oncorhynchus tshawytscha (Chinook salmon): 112226480
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Entry
112226480 CDS
T05605
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112226480
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112226480
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
112226480
NCBI-ProteinID:
XP_024246611
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All DBs
Position
LG28:complement(25771483..25783731)
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AA seq
817 aa
AA seq
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MFLLDLIRKTGTSSVEVKENRDSRNQVDYSTILQPGHHTSSALCTDISKRKTTVDCTLVP
AHHTPALNTDISSGLSRTTALQRKQPLVEGKDRLLYELQLICKKTAHCLTSDSATTPSAR
LVGGRASHGSDATCQKTMMTSWSGTKKNALVHLNELRPGLQYEIVSQTGPVHAPVFAVGV
EVNGLRFEGRGPTKKKAKMRAAELALRSFIQFPNAHQAHITMGNLNFINTTAPADFTSDQ
ADLVPDTLFKEFQPEAQEDQILLYRAVKKGQELLSSICNHGRLVRLTLDLMSSANQKRQR
IGSSIVGELRPVALLNEIMPGLRYVCLTERKKGRPIRSFVMAVRVDGRVFEGCGRSKRLA
KAEAAVSALQDLFNISLGPERSISNTASWAKSAQLPQCFAEYIFHLVREKHSALADCCCT
PSQSHRRHKVLAGIVMTRGFDLRRAQVVSLGTGTKCISGECVSDQGWAVNDCHAEVTTRR
AFLRFLYAQLELFLCNRPGSLEQSIFVREKESVYRLRDGILFHMYVSSSPCGDARLNCPY
EITATHQSGYRFVRKLRCHLRMKMEGGEGTLPVSVLRANQKWDRRLPREAPVTMSCTDKI
ARWNILGLQGSLLSHLVEPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNRLL
LGCLSSSEGRQPGKSPSFSVNWSAGDGELEVVDVSTGRKDSGTPSRLCKRSFFTRWERLH
HQLSSPGGVLDAEEAHFLMSDSTTTLSARSVEGRVSPRSDATCRKKMEEAMKTYCGAKMA
AGAYQRARQKFVVSLQEAGLGIWNRKPPEQEHFQSRV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttctggacttgattcggaaaacaggtaccagcagcgttgaggtgaaggagaac
cgcgacagcagaaaccaagtggactattccaccatactacaacctggacatcatacatca
tcagctctttgcactgacatctccaaaagaaagacgacagtggactgtaccctggtacct
gcacatcatacaccagctcttaacactgacatctccagtgggctctccaggaccactgct
ctacagaggaagcagccattggtggaaggaaaagacaggcttctctacgaactccagttg
atttgtaagaagacggcccattgtctcacctcagatagcgccacgactccgtctgcacgg
ttggttgggggacgagcgtcgcatgggagtgatgccacctgtcagaagacaatgatgact
tcctggtctggcacaaagaagaatgccctggtgcatttgaatgagctgagaccaggtcta
cagtatgagatagtgtctcagacaggtccagttcacgcccctgtgttcgctgtaggagta
gaggtcaacggtctcaggttcgagggccgaggccccaccaagaagaaggctaagatgagg
gcagcagagctggctcttaggtccttcatccagttccccaacgcccatcaggctcacatc
accatgggaaacctcaacttcatcaacaccacagcaccagcagacttcacctcagatcag
gctgatctcgtccccgacacgctcttcaaggagtttcagccagaagcacaggaagaccaa
atccttctctacagagcagtgaaaaaaggacaggagttgctctccagtatctgtaaccat
gggagactagtgcgcctgacccttgacctgatgtcctcagccaatcagaagaggcagagg
atcggttcctctatcgttggggaactgaggcccgtggctctgctcaatgagataatgcca
ggcttgaggtacgtctgcctgacagagagaaagaaaggcaggccgatcaggagctttgtg
atggcagtacgggtggatggaagggtatttgagggctgtgggcgcagtaagaggctggct
aaagccgaggcagcagtctcagccctacaggacctgtttaacatcagtctgggtcctgag
aggagcatcagcaatactgccagctgggccaagagcgcacagctacctcagtgctttgca
gagtatatcttccacttggtgagagagaaacacagtgcgctggctgactgttgctgcact
ccctcccagtcgcacaggcgtcacaaagtactggcaggcatcgtaatgaccagaggtttt
gatctgaggcgtgcccaggtggtgtctttggggacagggaccaagtgtatcagtggagag
tgtgtcagtgaccagggatgggcggttaatgactgccatgctgaggtcaccaccagaagg
gctttcctccgcttcctctatgcccaactggagcttttcctctgcaaccggccaggcagt
ttggagcagtcgatttttgtgcgagagaaagagtcagtatacagactgagagacggtatt
ctgttccatatgtatgtgagttcatcgccctgcggggacgcacgcctcaactgtccctac
gagatcacagctacacaccagagcgggtatagatttgtgaggaagttgcgctgccatctg
aggatgaagatggaaggcggtgagggtacacttcctgtcagcgtactgagagccaatcag
aaatgggacaggaggttgccgagggaagctcccgtaaccatgtcctgcacagataaaatt
gccaggtggaatattctaggtctccagggctctctcctatctcacctggtggagccggtg
tacctccacagcctcacagtgggcagcctgtgccacacgggtcacctgggaaggaccatg
gcacgacgcatggggcacatcgcccctctgccctcgtcatatagacgcaacaggctactg
ctcggctgcctcagcagcagtgagggtcggcagccagggaagtccccaagcttcagtgtg
aactggagtgctggagatggagagctggaggtggtggatgtctccacaggcaggaaagac
tcagggacaccatccagactctgcaagagatccttcttcactcgctgggagagactacac
caccagcttagcagtccaggaggagtattggatgcagaggaggcccattttcttatgtca
gatagcacaacgactctgtctgcacggtcggttgagggaagagtatcgcctaggagtgat
gccacctgtcggaagaaaatggaggaggccatgaagacgtactgtggagctaagatggca
gcaggggcctaccagagagccaggcagaagtttgtcgtctcgctgcaggaggcaggtctg
ggcatctggaacaggaaaccaccagaacaggagcatttccagagcagggtgtga
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