Oncorhynchus tshawytscha (Chinook salmon): 112226560
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Entry
112226560 CDS
T05605
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112226560
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112226560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
112226560
NCBI-ProteinID:
XP_024246726
LinkDB
All DBs
Position
LG28:complement(5987821..6103956)
Genome browser
AA seq
1306 aa
AA seq
DB search
MADGPRCKRRKQANPKRNNVTNYNNVVEGQSDSDDEDKLHIVEEDPDGDSTVPEDASVVL
TQNGTETHQDTWDGVKEDCGSEEEDEEEGEEGEEGGKDALVEEMLQLGDTAVIYPEAPED
EQKSMPERRVPDENGTPDALSQLLTCPYCSRGYKRCTALKEHIKLRHEKSEDNFSCSQCS
YTFAYRTQLDRHMTQHKTQHKEPVQRHMPQTTTTTGGNRKFMCTECSKAFKYKHHLKEHL
RIHSGEKPYECHNCKKRFSHSGSYSSHISSKKCVGMVPVNGTPRPVMKASQTPTTQNQLS
GTAPVAPTRLLLRGEKTDGKPLQEQLPVNQIKSEPVEYEYKPVAVGPNGAAGTNGTVFTG
GMAVPQGTVQAVVLPTVGLMSPISINLSDLQNVLKVAMDGNVFRQVLGTANGLVTSKQGV
VGQAGQQVISAISLPGFVDQDGTTKIIINYTLEPSLAQQPSAPQLLKKEPLPAPTTTNTQ
PASKVTEKLIQDLSIIKTEQPDSESEKEMEKEEAQTEAEQSKEGETPKAQTGKTTCLLCD
DCPGGLDALHMLQHCKPTNGEGGDGSPLDPSIAALLAEAGITPGQPPLKNLLSLLKAYFA
LNAEPTEEELTKISDNVSLPVDIVKKWFEKMQSGQITVEPPGSFSPLPSTGPSTETQAAQ
EKSGEQTEEQLASAQTQETSSSQPPNSSPASTSASPLVSASAPSPLNLSSSGRVIVKTEE
DSEGESQDLPLDLSLPKQPQSEPQVPHVPQEQPLNLTCLKKETSHPQLQAQLQPQLPGFQ
TQLQSQLQPQLQAQIQAQLQPQLQAQLQPQLQTQLPGFQTQLQAQGTTNTIYVTSPPQMA
TSSPVNIMTTQLVAITNQGSGVPCLRAISTGTTKRTILIPQLTYTYTTKAGSNATGADGA
QKTVILNGCQEEEKADTSSESVSAVEEQNDSDSAPPQKKMRRLESGMYACDLCDKIFQKS
SSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEHTRLHSGEKPYRCDKCGKCFSHSGSYS
QHMNHRYSYCKKEPQGDHQVGHRLRMTPEMSSQAEEQQSDSRPTSPPSQLDSDERESEEE
LEEEEGEEEGMEAMSMDDIRVVQVGEDDEESEIYEEEEEGSREEEAQQEEEEGQQEEEEA
QQEEEEAQQEEEEEEGSREEEAQQEEEEGQQENKEEGRREEEKYVQQEQVCEEEEEGRRE
EEEEGRREEEAHQKEGEEEEWRREEESREESVQQEKDVYEEEEEEEMEVQVMGDGEGEEG
EAEKETVVTEKAKETEDKELHVDKENITETLENGQKETEENKMNSE
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggaataacgta
acaaattacaacaatgttgtggagggccagtcagactctgatgatgaggacaagctacac
atagtggaggaagaccctgatggtgacagcacggtgccagaagacgcctcagtagtatta
acccagaacggtacagagactcaccaagacacctgggatggagtgaaggaggactgtggc
tctgaagaggaggatgaggaggaaggggaagagggggaggaggggggtaaggatgccctg
gtagaggagatgctacagttgggggatacagcggtcatctaccccgaagctccagaggac
gagcagaagagcatgcctgagagacgggtcccagacgagaatggcacgccagacgctctt
tcccagctcctgacctgcccgtactgctcgcggggctacaaacgctgcactgccctgaag
gagcacatcaagctgcgccacgagaagagtgaggacaacttcagctgctcccagtgcagc
tacaccttcgcctaccgcacacagctggaccgtcatatgacccaacacaagactcaacac
aaggaacctgtacagcgccacatgccccaaaccacgacaacaacaggggggaataggaag
ttcatgtgtacagagtgttccaaggcgtttaaatacaagcaccacctgaaggagcacctg
cgtattcacagcggagagaagccatacgagtgccacaattgtaagaagcgattttcccac
tccgggtcctacagctcccacatcagcagtaagaagtgtgttggcatggtgcctgtcaac
ggtaccccccgaccagtcatgaaggcctcccagacccccaccacccagaaccagctttcc
ggcactgcccccgtagcccctacccgactgctcctccggggggagaagacagatggcaag
ccccttcaggagcagctccccgtcaaccagatcaaatcagagccggtggaatatgagtac
aagccggtggcagtggggcctaacggggcagcagggactaacgggacagtgtttaccggt
ggcatggcggtaccccagggcacggtccaagcggtggtactgcccaccgttggtttgatg
tctcctataagtattaatctcagcgacctgcagaacgtactcaaggtggccatggatggg
aacgtgtttcgccaggtgctggggacggccaacgggctggtgacgtccaagcagggggtg
gtggggcaggctgggcagcaggtcatctcagccatcagcctccctggcttcgtggaccaa
gacggaaccaccaagatcattattaactacaccctggagcccagcttggcccaacagccc
agcgcacctcagctcctcaagaaggaacctctccctgcccccaccaccacaaacacacag
ccagcctccaaagtaacagagaaactcatccaggacctcagcatcatcaagaccgagcag
cccgactctgagtctgagaaggagatggagaaagaggaggctcagaccgaggcagagcag
agtaaggagggtgaaacaccaaaggcccagacaggcaagacaacatgtctgctgtgtgat
gactgtcctggtggtttggatgcactacacatgctccagcactgtaaacctaccaatggg
gaggggggtgacggcagccccctggacccctctatcgccgccctgctggcagaagcaggg
ataacaccaggccagccccctctgaagaacctgctctccctcctcaaggcctactttgcc
ttaaacgcagagcccaccgaggaagagctgaccaagatctctgacaacgtcagcttgccc
gtggacatagtcaagaaatggtttgagaagatgcagtccggtcagattactgtcgagccc
cctggttccttttcccctctaccttcaacaggtcctagcacagagacccaggcggcccaa
gagaagagcggagagcagacagaggagcaactcgcctcggcccaaacccaggagacatca
tcttcccaacctcccaacagttcccctgcctcgacctccgcctcccccttggtctcagcc
tcggctccctcaccactaaacctctcctccagcggccgggtcatcgtgaaaacggaggag
gactcagagggcgagtctcaagatcttcccctggacctgtcccttcccaagcagccccaa
tcagagccccaggtcccccatgtcccccaggagcaacccctcaacctcacctgtttgaag
aaggaaacgtcccatccccagctccaggcccagctccaaccccagctcccagggttccaa
acccagctccagtcccagctccaaccccagctccaagcccagatccaggcccagctccaa
ccccagctccaggcccagctccaaccccagctccagacccagctcccaggattccaaacc
cagctccaggctcagggaaccaccaacaccatctacgtcacttcccccccgcagatggcc
acctccagcccggttaacatcatgaccacccagctagtagccatcaccaaccagggcagc
ggtgtgccctgtctcagggccatctccactggcaccaccaaacggactatcctcatcccc
cagcttacctacacatacaccactaaagcaggcagcaacgccactggggccgacggagcc
cagaagaccgtcatactcaacggctgccaggaggaggagaaggctgacaccagttcagag
agcgtgtcggcggtagaggagcagaatgactcggactcagcccctccacagaagaagatg
cgtcggctggagagtggcatgtatgcctgtgacctatgtgacaagatcttccagaagagc
agctccctgctcaggcataaatacgaacacacaggaaaacgtccacacgagtgtggcatc
tgcaacaaagccttcaaacacaagcaccacttgatagagcacacgcgtctgcactccgga
gagaagccctaccggtgtgacaagtgtggcaagtgtttctcccactcgggctcctactcc
cagcacatgaaccaccgatactcatactgcaagaaggagccccaaggagatcatcaggtg
gggcatcggctcaggatgacccccgaaatgagctcccaagcagaggagcagcagtcagat
agccggcccacctcccctccctcccaactggactcagacgagagggagagtgaggaggag
ctggaggaagaggaaggagaggaggaaggcatggaagccatgagcatggacgacatacgg
gtggtgcaggtgggcgaggatgatgaagagagtgaaatctacgaggaggaggaagaaggg
agcagagaggaggaggcacagcaggaagaggaggagggacagcaggaagaggaggaggca
cagcaggaagaggaggaggcacagcaggaagaggaggaggaagaagggagcagagaggag
gaggcacagcaggaagaggaggagggacagcaggaaaataaggaggaagggaggagagag
gaagagaagtatgtacagcaggagcaggtgtgtgaggaagaggaggaagggagaagagag
gaggaggaagaagggaggagagaggaggaggcacaccagaaggagggggaggaagaggaa
tggaggagagaggaagagagcagagaggagtctgtacagcaggagaaagatgtgtatgag
gaagaggaggaggaggagatggaggtacaggtgatgggagatggggagggggaggaagga
gaggcagagaaggaaactgtggtaacagagaaggctaaggaaacagaggacaaagaactg
catgtggacaaggagaacattacagaaacattagaaaatggacagaaagaaacagaggaa
aacaagatgaacagtgaatga
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